RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 MTFR1Q15390 333 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 PTPROQ16827 1216 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 NOL8Q76FK4 1167 aaKnown RBP7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 HS2ST1Q7LGA3 356 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 GGT7Q9UJ14 662 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 ARID4BQ4LE39 1312 aaPredicted RBP7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
SRGAP3-205ENST00000475560 EIF1AYO14602 144 aaKnown RBP7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 CLSTN1O94985 981 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 NEFLP07196 543 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 ATF4P18848 351 aaPredicted RBP7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 PTPN5P54829 565 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 VASH1Q7L8A9 365 aaPredicted RBP7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 JAZF1Q86VZ6 243 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 TMPRSS4Q9NRS4 437 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 MAP4K5Q9Y4K4 846 aa7.19□□□□□ -1.26
SRGAP3-205ENST00000475560 CDK2AP1O14519 115 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 GNRH1P01148 92 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 GJA8P48165 433 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 ORC1Q13415 861 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 BMS1Q14692 1282 aaKnown RBP7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 ESCO1Q5FWF5 840 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 IFFO2Q5TF58 517 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 MICAL1Q8TDZ2 1067 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 KCNB2Q92953 911 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 CHMP3Q9Y3E7 222 aa7.18□□□□□ -1.26
SRGAP3-205ENST00000475560 HSD3B2P26439 372 aa7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 ZAP70P43403 619 aa7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 NFE2L2Q16236 605 aa7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 NGLY1Q96IV0 654 aa7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 DMGDHQ9UI17 866 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 TTBK1Q5TCY1 1321 aaPredicted RBP7.17□□□□□ -1.26
SRGAP3-205ENST00000475560 hCG_2014768A0A024R1R8 64 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 GIPC1O14908 333 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 PCSK2P16519 638 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 IBSPP21815 317 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 PAK2Q13177 524 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 IFT43Q96FT9 208 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 XAGE2Q96GT9 111 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 MRFAP1L1Q96HT8 127 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 GGNBP2Q9H3C7 697 aa7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 V9GY48 417 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-205ENST00000475560 OPLAHO14841 1288 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 DGKZQ13574 1117 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 CYP2U1Q7Z449 544 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 OSBPL7Q9BZF2 842 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 BRINP2Q9C0B6 783 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 C12orf49Q9H741 205 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 METTL14Q9HCE5 456 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 NEUROD4Q9HD90 331 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 HCN4Q9Y3Q4 1203 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 MRPL42Q9Y6G3 142 aaKnown RBP7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 USP3Q9Y6I4 520 aa7.15□□□□□ -1.26
SRGAP3-205ENST00000475560 SERTM1A2A2V5 107 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 EML1O00423 815 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 CPNE3O75131 537 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 XRCC5P13010 732 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 TEAD4Q15561 434 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 CERS3Q8IU89 383 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 CKAP2LQ8IYA6 745 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 ALDH16A1Q8IZ83 802 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 MKL1Q969V6 931 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 GPRASP2Q96D09 838 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 NUDT16Q96DE0 195 aaKnown RBP7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 MTRQ99707 1265 aa7.14□□□□□ -1.27
SRGAP3-205ENST00000475560 K7ELQ4 463 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 LILRA1O75019 489 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 NOS2P35228 1153 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 ST13P50502 369 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 HIRAP54198 1017 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 WNT7BP56706 349 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 ANAPC15P60006 121 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 RTN1Q16799 776 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 RNF187Q5TA31 235 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 MEI1Q5TIA1 1274 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 NBPF6Q5VWK0 638 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 ZNF784Q8NCA9 323 aaPredicted RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 NBPF4Q96M43 638 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 KLK14Q9P0G3 267 aa7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 NOP58Q9Y2X3 529 aaKnown RBP7.13□□□□□ -1.27
SRGAP3-205ENST00000475560 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 ADD1P35611 737 aaKnown RBP7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 SERINC3Q13530 473 aa7.12□□□□□ -1.27
SRGAP3-205ENST00000475560 SH3PXD2AQ5TCZ1 1133 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms