RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 DALRD3Q5D0E6 543 aaKnown RBP16.14■□□□□ 0.17
SSR1-205ENST00000475213 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
SSR1-205ENST00000475213 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
SSR1-205ENST00000475213 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
SSR1-205ENST00000475213 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
SSR1-205ENST00000475213 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
SSR1-205ENST00000475213 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
SSR1-205ENST00000475213 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSR1-205ENST00000475213 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
SSR1-205ENST00000475213 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
SSR1-205ENST00000475213 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
SSR1-205ENST00000475213 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 PRR5LQ6MZQ0 368 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
SSR1-205ENST00000475213 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
SSR1-205ENST00000475213 SBF1O95248 1867 aa16.1■□□□□ 0.17
SSR1-205ENST00000475213 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
SSR1-205ENST00000475213 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
SSR1-205ENST00000475213 CCDC24Q8N4L8 307 aa16.1■□□□□ 0.17
SSR1-205ENST00000475213 H0YIN7 160 aa16.09■□□□□ 0.17
SSR1-205ENST00000475213 C1QTNF8P60827 252 aa16.09■□□□□ 0.17
SSR1-205ENST00000475213 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
SSR1-205ENST00000475213 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
SSR1-205ENST00000475213 GPBP1L1Q9HC44 474 aaPredicted RBP16.09■□□□□ 0.17
SSR1-205ENST00000475213 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
SSR1-205ENST00000475213 NUP98P52948 1817 aa16.09■□□□□ 0.17
SSR1-205ENST00000475213 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.17
SSR1-205ENST00000475213 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
SSR1-205ENST00000475213 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
SSR1-205ENST00000475213 RGL2O15211 777 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 NPHP1O15259 732 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 PDE6BP35913 854 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
SSR1-205ENST00000475213 ST5P78524 1137 aa16.06■□□□□ 0.16
SSR1-205ENST00000475213 HLFQ16534 295 aa16.06■□□□□ 0.16
SSR1-205ENST00000475213 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
SSR1-205ENST00000475213 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
SSR1-205ENST00000475213 NIP7Q9Y221 180 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSR1-205ENST00000475213 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
SSR1-205ENST00000475213 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
SSR1-205ENST00000475213 MYL6BP14649 208 aa16.05■□□□□ 0.16
SSR1-205ENST00000475213 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
SSR1-205ENST00000475213 ZNF622Q969S3 477 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSR1-205ENST00000475213 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
SSR1-205ENST00000475213 ERVV-1B6SEH8 477 aa16.04■□□□□ 0.16
SSR1-205ENST00000475213 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
SSR1-205ENST00000475213 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
SSR1-205ENST00000475213 CHL1O00533 1208 aa16.03■□□□□ 0.16
SSR1-205ENST00000475213 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
SSR1-205ENST00000475213 SLX4Q8IY92 1834 aa16.03■□□□□ 0.16
SSR1-205ENST00000475213 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
SSR1-205ENST00000475213 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
SSR1-205ENST00000475213 RASSF7Q02833 373 aa16.02■□□□□ 0.16
SSR1-205ENST00000475213 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
SSR1-205ENST00000475213 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
SSR1-205ENST00000475213 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
SSR1-205ENST00000475213 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
SSR1-205ENST00000475213 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
SSR1-205ENST00000475213 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
SSR1-205ENST00000475213 SRGNP10124 158 aa16.01■□□□□ 0.15
SSR1-205ENST00000475213 PDIA6Q15084 440 aa16.01■□□□□ 0.15
SSR1-205ENST00000475213 LRP10Q7Z4F1 713 aa16.01■□□□□ 0.15
SSR1-205ENST00000475213 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
SSR1-205ENST00000475213 APAF1O14727 1248 aa16■□□□□ 0.15
SSR1-205ENST00000475213 KIF3CO14782 793 aa16■□□□□ 0.15
SSR1-205ENST00000475213 PRELPP51888 382 aa16■□□□□ 0.15
SSR1-205ENST00000475213 KRT24Q2M2I5 525 aa16■□□□□ 0.15
SSR1-205ENST00000475213 PROSER3Q2NL68 480 aa16■□□□□ 0.15
SSR1-205ENST00000475213 CCDC184Q52MB2 194 aa16■□□□□ 0.15
SSR1-205ENST00000475213 STYK1Q6J9G0 422 aa16■□□□□ 0.15
SSR1-205ENST00000475213 CNKSR1Q969H4 720 aa16■□□□□ 0.15
SSR1-205ENST00000475213 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
SSR1-205ENST00000475213 KLRG2A4D1S0 409 aaPredicted RBP15.99■□□□□ 0.15
SSR1-205ENST00000475213 NFKBIEO00221 500 aa15.99■□□□□ 0.15
SSR1-205ENST00000475213 C21orf2O43822 256 aa15.99■□□□□ 0.15
SSR1-205ENST00000475213 ANXA1P04083 346 aa15.99■□□□□ 0.15
SSR1-205ENST00000475213 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
SSR1-205ENST00000475213 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
SSR1-205ENST00000475213 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
SSR1-205ENST00000475213 LMNB1P20700 586 aa15.98■□□□□ 0.15
SSR1-205ENST00000475213 GPTP24298 496 aa15.98■□□□□ 0.15
SSR1-205ENST00000475213 PRPF40BQ6NWY9 871 aaKnown RBP15.98■□□□□ 0.15
SSR1-205ENST00000475213 GIGYF2Q6Y7W6 1299 aaKnown RBP15.98■□□□□ 0.15
SSR1-205ENST00000475213 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
SSR1-205ENST00000475213 NYXQ9GZU5 481 aa15.98■□□□□ 0.15
SSR1-205ENST00000475213 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
SSR1-205ENST00000475213 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
SSR1-205ENST00000475213 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
SSR1-205ENST00000475213 NPR1P16066 1061 aa15.97■□□□□ 0.15
SSR1-205ENST00000475213 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
SSR1-205ENST00000475213 NUTM1Q86Y26 1132 aa15.97■□□□□ 0.15
SSR1-205ENST00000475213 ZNF34Q8IZ26 560 aa15.97■□□□□ 0.15
SSR1-205ENST00000475213 NMRK2Q9NPI5 230 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 546 ms