RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 RIPK4P57078 832 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
SNRPE-205ENST00000475035 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
SNRPE-205ENST00000475035 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
SNRPE-205ENST00000475035 CNBD1Q8NA66 436 aa11.37□□□□□ -0.59
SNRPE-205ENST00000475035 PRKRIP1Q9H875 184 aaPredicted RBP11.37□□□□□ -0.59
SNRPE-205ENST00000475035 TSPYL4Q9UJ04 414 aa11.37□□□□□ -0.59
SNRPE-205ENST00000475035 COL11A2P13942 1736 aaPredicted RBP11.36□□□□□ -0.59
SNRPE-205ENST00000475035 H0YIN7 160 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 TMPOP42166 694 aaKnown RBP11.36□□□□□ -0.59
SNRPE-205ENST00000475035 EIF4A1P60842 406 aaKnown RBP11.36□□□□□ -0.59
SNRPE-205ENST00000475035 ST5P78524 1137 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 CLEC4GQ6UXB4 293 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 C2CD5Q86YS7 1000 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 CCDC146Q8IYE0 955 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
SNRPE-205ENST00000475035 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
SNRPE-205ENST00000475035 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 RGL2O15211 777 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 PDE6BP35913 854 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 C1QTNF8P60827 252 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 PRR5LQ6MZQ0 368 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
SNRPE-205ENST00000475035 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 RUNDC1Q96C34 613 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 SBF1O95248 1867 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 CACNA1SQ13698 1873 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 NUP98P52948 1817 aa11.35□□□□□ -0.59
SNRPE-205ENST00000475035 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
SNRPE-205ENST00000475035 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
SNRPE-205ENST00000475035 NBPF5PQ86XG9 351 aaPredicted RBP11.34□□□□□ -0.59
SNRPE-205ENST00000475035 TTLL6Q8N841 843 aa11.34□□□□□ -0.59
SNRPE-205ENST00000475035 BRIP1Q9BX63 1249 aa11.34□□□□□ -0.59
SNRPE-205ENST00000475035 BABAM1Q9NWV8 329 aa11.34□□□□□ -0.59
SNRPE-205ENST00000475035 RRP7AQ9Y3A4 280 aaKnown RBP11.34□□□□□ -0.59
SNRPE-205ENST00000475035 ARFGEF2Q9Y6D5 1785 aa11.33□□□□□ -0.59
SNRPE-205ENST00000475035 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
SNRPE-205ENST00000475035 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
SNRPE-205ENST00000475035 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNRPE-205ENST00000475035 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
SNRPE-205ENST00000475035 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 MYL6BP14649 208 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPE-205ENST00000475035 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 PCNTO95613 3336 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
SNRPE-205ENST00000475035 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 MAP3K15Q6ZN16 1313 aa11.31□□□□□ -0.6
SNRPE-205ENST00000475035 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
SNRPE-205ENST00000475035 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
SNRPE-205ENST00000475035 RASSF7Q02833 373 aa11.3□□□□□ -0.6
SNRPE-205ENST00000475035 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
SNRPE-205ENST00000475035 LAS1LQ9Y4W2 734 aaKnown RBP11.3□□□□□ -0.6
SNRPE-205ENST00000475035 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
SNRPE-205ENST00000475035 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
SNRPE-205ENST00000475035 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
SNRPE-205ENST00000475035 FER1L6Q2WGJ9 1857 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
SNRPE-205ENST00000475035 LMNB1P20700 586 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 HLFQ16534 295 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 STYK1Q6J9G0 422 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 TTLL7Q6ZT98 887 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
SNRPE-205ENST00000475035 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
SNRPE-205ENST00000475035 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
SNRPE-205ENST00000475035 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
SNRPE-205ENST00000475035 SRGNP10124 158 aa11.28□□□□□ -0.6
SNRPE-205ENST00000475035 CALD1Q05682 793 aaKnown RBP11.28□□□□□ -0.6
SNRPE-205ENST00000475035 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
SNRPE-205ENST00000475035 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
SNRPE-205ENST00000475035 CHL1O00533 1208 aa11.27□□□□□ -0.61
SNRPE-205ENST00000475035 C21orf2O43822 256 aa11.27□□□□□ -0.61
SNRPE-205ENST00000475035 NPR1P16066 1061 aa11.27□□□□□ -0.61
SNRPE-205ENST00000475035 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
SNRPE-205ENST00000475035 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
SNRPE-205ENST00000475035 NFKBIEO00221 500 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 APAF1O14727 1248 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 HOXB7P09629 217 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 GPTP24298 496 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 GIGYF2Q6Y7W6 1299 aaKnown RBP11.26□□□□□ -0.61
SNRPE-205ENST00000475035 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 TAOK3Q9H2K8 898 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
SNRPE-205ENST00000475035 KLRG2A4D1S0 409 aaPredicted RBP11.25□□□□□ -0.61
SNRPE-205ENST00000475035 KIF3CO14782 793 aa11.25□□□□□ -0.61
SNRPE-205ENST00000475035 ANP32CO43423 234 aa11.25□□□□□ -0.61
SNRPE-205ENST00000475035 ANXA1P04083 346 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms