RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
DDX39B-217ENST00000474961 LY75O60449 1722 aa12.23□□□□□ -0.45
DDX39B-217ENST00000474961 TCERG1O14776 1098 aaKnown RBP12.22□□□□□ -0.45
DDX39B-217ENST00000474961 FBXO22Q8NEZ5 403 aa12.22□□□□□ -0.45
DDX39B-217ENST00000474961 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
DDX39B-217ENST00000474961 TJP1Q07157 1748 aa12.22□□□□□ -0.45
DDX39B-217ENST00000474961 PALLDQ8WX93 1383 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 BCAR3O75815 825 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 EIF2S2P20042 333 aaKnown RBP12.21□□□□□ -0.45
DDX39B-217ENST00000474961 ALDH1L2Q3SY69 923 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 HDGFL1Q5TGJ6 251 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 CCDC30Q5VVM6 783 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 SUPT16HQ9Y5B9 1047 aaKnown RBP12.21□□□□□ -0.45
DDX39B-217ENST00000474961 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
DDX39B-217ENST00000474961 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
DDX39B-217ENST00000474961 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 BCL2L13Q9BXK5 485 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 CHMP4AQ9BY43 222 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 USP16Q9Y5T5 823 aa12.2□□□□□ -0.46
DDX39B-217ENST00000474961 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-217ENST00000474961 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
DDX39B-217ENST00000474961 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
DDX39B-217ENST00000474961 SIK1P57059 783 aa12.19□□□□□ -0.46
DDX39B-217ENST00000474961 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
DDX39B-217ENST00000474961 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
DDX39B-217ENST00000474961 TEX13AQ9BXU3 409 aaPredicted RBP12.19□□□□□ -0.46
DDX39B-217ENST00000474961 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-217ENST00000474961 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
DDX39B-217ENST00000474961 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
DDX39B-217ENST00000474961 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
DDX39B-217ENST00000474961 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
DDX39B-217ENST00000474961 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
DDX39B-217ENST00000474961 STARD3NLO95772 234 aa12.17□□□□□ -0.46
DDX39B-217ENST00000474961 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-217ENST00000474961 ITPK1Q13572 414 aa12.17□□□□□ -0.46
DDX39B-217ENST00000474961 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
DDX39B-217ENST00000474961 PLIN1O60240 522 aa12.16□□□□□ -0.46
DDX39B-217ENST00000474961 APBA3O96018 575 aa12.16□□□□□ -0.46
DDX39B-217ENST00000474961 ANXA1P04083 346 aa12.16□□□□□ -0.46
DDX39B-217ENST00000474961 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-217ENST00000474961 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
DDX39B-217ENST00000474961 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
DDX39B-217ENST00000474961 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX39B-217ENST00000474961 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
DDX39B-217ENST00000474961 DBF4Q9UBU7 674 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-217ENST00000474961 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 A1BGP04217 495 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 KCNQ4P56696 695 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 PDIA6Q15084 440 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 PROSER3Q2NL68 480 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 G2E3Q7L622 706 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-217ENST00000474961 FRAT1Q92837 279 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-217ENST00000474961 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-217ENST00000474961 NOB1Q9ULX3 412 aaKnown RBP12.15□□□□□ -0.46
DDX39B-217ENST00000474961 RREB1Q92766 1687 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-217ENST00000474961 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
DDX39B-217ENST00000474961 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 NBPF26B4DH59 902 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 PLSCR1O15162 318 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
DDX39B-217ENST00000474961 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
DDX39B-217ENST00000474961 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 NBPF10Q6P3W6 841 aaKnown RBP12.14□□□□□ -0.47
DDX39B-217ENST00000474961 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 LINC00116Q8NCU8 138 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
DDX39B-217ENST00000474961 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
DDX39B-217ENST00000474961 MYL6BP14649 208 aa12.13□□□□□ -0.47
DDX39B-217ENST00000474961 ZKSCAN2Q63HK3 967 aa12.13□□□□□ -0.47
DDX39B-217ENST00000474961 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX39B-217ENST00000474961 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
DDX39B-217ENST00000474961 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
DDX39B-217ENST00000474961 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
DDX39B-217ENST00000474961 FLIIQ13045 1269 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
DDX39B-217ENST00000474961 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 EP400Q96L91 3159 aa12.12□□□□□ -0.47
DDX39B-217ENST00000474961 PTPRCP08575 1304 aa12.11□□□□□ -0.47
DDX39B-217ENST00000474961 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
DDX39B-217ENST00000474961 TRIM27P14373 513 aa12.11□□□□□ -0.47
DDX39B-217ENST00000474961 SF3B2Q13435 895 aaKnown RBP12.11□□□□□ -0.47
DDX39B-217ENST00000474961 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
DDX39B-217ENST00000474961 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
DDX39B-217ENST00000474961 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms