RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 NFIXQ14938 502 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 PROSER3Q2NL68 480 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 TSPYL6Q8N831 410 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 SYT17Q9BSW7 474 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 ZNF652Q9Y2D9 606 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 PARP3Q9Y6F1 533 aa10.36□□□□□ -0.75
HPS1-210ENST00000474873 EXOSC9Q06265 439 aaKnown RBP10.35□□□□□ -0.75
HPS1-210ENST00000474873 DDR1Q08345 913 aa10.35□□□□□ -0.75
HPS1-210ENST00000474873 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
HPS1-210ENST00000474873 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
HPS1-210ENST00000474873 TTLL7Q6ZT98 887 aa10.35□□□□□ -0.75
HPS1-210ENST00000474873 COPS6Q7L5N1 327 aa10.35□□□□□ -0.75
HPS1-210ENST00000474873 MAP3K15Q6ZN16 1313 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 POLRMTO00411 1230 aaKnown RBP10.34□□□□□ -0.75
HPS1-210ENST00000474873 VAMP4O75379 141 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 ANXA1P04083 346 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 SLFN5Q08AF3 891 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 TBC1D9BQ66K14 1250 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
HPS1-210ENST00000474873 SERPINB2P05120 415 aa10.33□□□□□ -0.76
HPS1-210ENST00000474873 HLFQ16534 295 aa10.33□□□□□ -0.76
HPS1-210ENST00000474873 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
HPS1-210ENST00000474873 TRMT2AQ8IZ69 625 aaKnown RBP10.33□□□□□ -0.76
HPS1-210ENST00000474873 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
HPS1-210ENST00000474873 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
HPS1-210ENST00000474873 SCN7AQ01118 1682 aa10.32□□□□□ -0.76
HPS1-210ENST00000474873 GOLGB1Q14789 3259 aaKnown RBP10.32□□□□□ -0.76
HPS1-210ENST00000474873 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
HPS1-210ENST00000474873 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
HPS1-210ENST00000474873 AIMP1Q12904 312 aaKnown RBP10.32□□□□□ -0.76
HPS1-210ENST00000474873 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
HPS1-210ENST00000474873 ANKRD13DQ6ZTN6 518 aa10.32□□□□□ -0.76
HPS1-210ENST00000474873 CDCA7LQ96GN5 454 aa10.32□□□□□ -0.76
HPS1-210ENST00000474873 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
HPS1-210ENST00000474873 NIP7Q9Y221 180 aaKnown RBP eCLIP10.32□□□□□ -0.76
HPS1-210ENST00000474873 TGFB2P61812 414 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 HSP90AB3PQ58FF7 597 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 ZNF34Q8IZ26 560 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 PLBD2Q8NHP8 589 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 ATP10DQ9P241 1426 aa10.31□□□□□ -0.76
HPS1-210ENST00000474873 SLC4A2P04920 1241 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 NBPF5PQ86XG9 351 aaPredicted RBP10.3□□□□□ -0.76
HPS1-210ENST00000474873 NLGN2Q8NFZ4 835 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 PHAXQ9H814 394 aaKnown RBP10.3□□□□□ -0.76
HPS1-210ENST00000474873 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
HPS1-210ENST00000474873 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
HPS1-210ENST00000474873 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
HPS1-210ENST00000474873 CT47B1P0C2W7 299 aaPredicted RBP10.29□□□□□ -0.76
HPS1-210ENST00000474873 PARP10Q53GL7 1025 aa10.29□□□□□ -0.76
HPS1-210ENST00000474873 PRR5LQ6MZQ0 368 aa10.29□□□□□ -0.76
HPS1-210ENST00000474873 CNBD1Q8NA66 436 aa10.29□□□□□ -0.76
HPS1-210ENST00000474873 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
HPS1-210ENST00000474873 NYXQ9GZU5 481 aa10.29□□□□□ -0.76
HPS1-210ENST00000474873 NUP98P52948 1817 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 NPHP1O15259 732 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 GPTP24298 496 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 PRELPP51888 382 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 ST5P78524 1137 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
HPS1-210ENST00000474873 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 UBN2Q6ZU65 1347 aa10.28□□□□□ -0.76
HPS1-210ENST00000474873 NRXN2Q9P2S2 1712 aa10.27□□□□□ -0.76
HPS1-210ENST00000474873 A0A0G2JLW4 131 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 DPEP1P16444 411 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.77
HPS1-210ENST00000474873 PDE6BP35913 854 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 FLIIQ13045 1269 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 SUSD4Q5VX71 490 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 G2E3Q7L622 706 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 ISCA1Q9BUE6 129 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 AFDNP55196 1824 aaKnown RBP10.27□□□□□ -0.77
HPS1-210ENST00000474873 KIF13BQ9NQT8 1826 aa10.27□□□□□ -0.77
HPS1-210ENST00000474873 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
HPS1-210ENST00000474873 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 PXDNLA1KZ92 1463 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 KLRG2A4D1S0 409 aaPredicted RBP10.26□□□□□ -0.77
HPS1-210ENST00000474873 PI4KAP2A4QPH2 592 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 FAM177BA6PVY3 158 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 H0YIN7 160 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 KCNA3P22001 575 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 PI4KAP1Q8N8J0 262 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 METTL22Q9BUU2 404 aaPredicted RBP10.26□□□□□ -0.77
HPS1-210ENST00000474873 UTP14AQ9BVJ6 771 aaKnown RBP10.26□□□□□ -0.77
HPS1-210ENST00000474873 MAP3K2Q9Y2U5 619 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 RNF123Q5XPI4 1314 aa10.26□□□□□ -0.77
HPS1-210ENST00000474873 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms