RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 LRRC69Q6ZNQ3 347 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 ZIC5Q96T25 663 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 GDPD2Q9HCC8 539 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 PCMTD2Q9NV79 361 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 DNAAF2Q9NVR5 837 aaKnown RBP2.26□□□□□ -2.05
HDAC9-222ENST00000474742 ZDHHC3Q9NYG2 299 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 ZNF232Q9UNY5 417 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 HRH3Q9Y5N1 445 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 PARP3Q9Y6F1 533 aa2.26□□□□□ -2.05
HDAC9-222ENST00000474742 BACH1O14867 736 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 SIN3BO75182 1162 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 ADH7P40394 386 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 MCTP1Q6DN14 999 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 C8orf86Q6ZUL3 223 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 TXNRD3Q86VQ6 643 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 MICALL1Q8N3F8 863 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 UBE2OQ9C0C9 1292 aaKnown RBP2.25□□□□□ -2.05
HDAC9-222ENST00000474742 JPH1Q9HDC5 661 aaPredicted RBP2.25□□□□□ -2.05
HDAC9-222ENST00000474742 STRN4Q9NRL3 753 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 COG6Q9Y2V7 657 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 CHMP3Q9Y3E7 222 aa2.25□□□□□ -2.05
HDAC9-222ENST00000474742 A6NJY4 79 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 ADARB2-AS1A8MUL3 147 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 CDK2AP1O14519 115 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 ALBP02768 609 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 IRAK1P51617 712 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 VAC14Q08AM6 782 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 SPEM2Q0P670 501 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 MBTPS1Q14703 1052 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 TSGA10IPQ3SY00 556 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 SAMD5Q5TGI4 173 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 RAB44Q7Z6P3 723 aaPredicted RBP2.24□□□□□ -2.05
HDAC9-222ENST00000474742 RHPN1Q8TCX5 695 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 ADAMTS19Q8TE59 1207 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 CEP63Q96MT8 703 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 PNMA5Q96PV4 448 aa2.24□□□□□ -2.05
HDAC9-222ENST00000474742 A0A0A0MRY4 1105 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 POM121CA8CG34 1229 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 EFSO43281 561 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 PTCD1O75127 700 aaKnown RBP2.23□□□□□ -2.05
HDAC9-222ENST00000474742 RGS9O75916 674 aaPredicted RBP2.23□□□□□ -2.05
HDAC9-222ENST00000474742 SSTR4P31391 388 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 TXLNAP40222 546 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 SCNN1DP51172 638 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 SFSWAPQ12872 951 aaKnown RBP2.23□□□□□ -2.05
HDAC9-222ENST00000474742 ADGRE1Q14246 886 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 MAP7D1Q3KQU3 841 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 SHISA2Q6UWI4 295 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 PHTF2Q8N3S3 785 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 FNBP4Q8N3X1 1017 aaPredicted RBP2.23□□□□□ -2.05
HDAC9-222ENST00000474742 NUDT8Q8WV74 236 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 BHMTQ93088 406 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 L3MBTL2Q969R5 705 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 CLUAP1Q96AJ1 413 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 LENG1Q96BZ8 264 aaPredicted RBP2.23□□□□□ -2.05
HDAC9-222ENST00000474742 KRTAP9-8Q9BYQ0 159 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 PRDM6Q9NQX0 595 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 ANKIB1Q9P2G1 1089 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 STARD13Q9Y3M8 1113 aa2.23□□□□□ -2.05
HDAC9-222ENST00000474742 SERTM1A2A2V5 107 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 SFI1A8K8P3 1242 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 NID1P14543 1247 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 SELPP16109 830 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 ABL2P42684 1182 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 SEMA3FQ13275 785 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 PSAPL1Q6NUJ1 521 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 DMRTC2Q8IXT2 367 aaPredicted RBP2.22□□□□□ -2.05
HDAC9-222ENST00000474742 TNFRSF25Q93038 417 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 SLC30A3Q99726 388 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 BRD7Q9NPI1 651 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 CHIC2Q9UKJ5 165 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 RNF112Q9ULX5 631 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 SLC6A14Q9UN76 642 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 KCNH4Q9UQ05 1017 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 NOD1Q9Y239 953 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 RNF114Q9Y508 228 aa2.22□□□□□ -2.05
HDAC9-222ENST00000474742 COL17A1Q9UMD9 1497 aaPredicted RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 KRTAP4-8A0A0G2JLE6 195 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 PIK3CDO00329 1044 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 NOS2P35228 1153 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 IREB2P48200 963 aaKnown RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 EML3Q32P44 896 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 TBCELQ5QJ74 424 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 WFDC8Q8IUA0 241 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 FMR1NBQ8N0W7 255 aaPredicted RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 PLPP7Q8NBV4 271 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 WFDC12Q8WWY7 111 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 SLC4A9Q96Q91 983 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 ALG2Q9H553 416 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 SCHIP1Q9P0W5 487 aaPredicted RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 HCN2Q9UL51 889 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 RBM19Q9Y4C8 960 aaKnown RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 GPC6Q9Y625 555 aaPredicted RBP2.21□□□□□ -2.06
HDAC9-222ENST00000474742 USP3Q9Y6I4 520 aa2.21□□□□□ -2.06
HDAC9-222ENST00000474742 TMEM229AB2RXF0 380 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 CPB1P15086 417 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 TAL1P17542 331 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms