RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 F6X3S4 739 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 ALDH1L1O75891 902 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 GNAI3P08754 354 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
COL12A1-206ENST00000474564 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 LINS1Q8NG48 757 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-206ENST00000474564 C9orf78Q9NZ63 289 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-206ENST00000474564 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 ABCC4O15439 1325 aa13.03□□□□□ -0.32
COL12A1-206ENST00000474564 RGL2O15211 777 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.33
COL12A1-206ENST00000474564 KCNQ4P56696 695 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-206ENST00000474564 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 C5P01031 1676 aa13.02□□□□□ -0.33
COL12A1-206ENST00000474564 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
COL12A1-206ENST00000474564 MYD88Q99836 296 aa13.01□□□□□ -0.33
COL12A1-206ENST00000474564 PPP4R2Q9NY27 417 aa13.01□□□□□ -0.33
COL12A1-206ENST00000474564 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
COL12A1-206ENST00000474564 COL15A1P39059 1388 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 MSH5O43196 834 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 SSFA2P28290 1259 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 TCIRG1Q13488 830 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
COL12A1-206ENST00000474564 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
COL12A1-206ENST00000474564 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
COL12A1-206ENST00000474564 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 PHF14O94880 888 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 UBTFL1P0CB47 393 aaPredicted RBP12.99□□□□□ -0.33
COL12A1-206ENST00000474564 RLBP1P12271 317 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
COL12A1-206ENST00000474564 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 CAMKK2Q96RR4 588 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 CWC25Q9NXE8 425 aaPredicted RBP12.99□□□□□ -0.33
COL12A1-206ENST00000474564 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 LY75O60449 1722 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 TJP1Q07157 1748 aa12.99□□□□□ -0.33
COL12A1-206ENST00000474564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
COL12A1-206ENST00000474564 NPHP1O15259 732 aa12.98□□□□□ -0.33
COL12A1-206ENST00000474564 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
COL12A1-206ENST00000474564 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
COL12A1-206ENST00000474564 PROM2Q8N271 834 aa12.98□□□□□ -0.33
COL12A1-206ENST00000474564 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
COL12A1-206ENST00000474564 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
COL12A1-206ENST00000474564 ADCY9O60503 1353 aa12.97□□□□□ -0.33
COL12A1-206ENST00000474564 ZBTB7BO15156 539 aaPredicted RBP12.97□□□□□ -0.33
COL12A1-206ENST00000474564 GNAI2P04899 355 aa12.97□□□□□ -0.33
COL12A1-206ENST00000474564 GTF2E1P29083 439 aaPredicted RBP12.97□□□□□ -0.33
COL12A1-206ENST00000474564 TRIM28Q13263 835 aaKnown RBP12.97□□□□□ -0.33
COL12A1-206ENST00000474564 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
COL12A1-206ENST00000474564 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 GRM8O00222 908 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 HMMRO75330 724 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 SETDB2Q96T68 719 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
COL12A1-206ENST00000474564 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
COL12A1-206ENST00000474564 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL12A1-206ENST00000474564 CAMTA2O94983 1202 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 GCKRQ14397 625 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 SLC15A2Q16348 729 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 CWF19L2Q2TBE0 894 aaKnown RBP12.95□□□□□ -0.34
COL12A1-206ENST00000474564 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 NYXQ9GZU5 481 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 ZBTB40Q9NUA8 1239 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
COL12A1-206ENST00000474564 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
COL12A1-206ENST00000474564 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
COL12A1-206ENST00000474564 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
COL12A1-206ENST00000474564 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
COL12A1-206ENST00000474564 GPTP24298 496 aa12.94□□□□□ -0.34
COL12A1-206ENST00000474564 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
COL12A1-206ENST00000474564 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
COL12A1-206ENST00000474564 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
COL12A1-206ENST00000474564 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
COL12A1-206ENST00000474564 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
COL12A1-206ENST00000474564 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
COL12A1-206ENST00000474564 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
COL12A1-206ENST00000474564 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
COL12A1-206ENST00000474564 HLFQ16534 295 aa12.93□□□□□ -0.34
COL12A1-206ENST00000474564 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
COL12A1-206ENST00000474564 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL12A1-206ENST00000474564 USP44Q9H0E7 712 aa12.93□□□□□ -0.34
COL12A1-206ENST00000474564 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
COL12A1-206ENST00000474564 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
COL12A1-206ENST00000474564 NLRP10Q86W26 655 aa12.92□□□□□ -0.34
COL12A1-206ENST00000474564 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
COL12A1-206ENST00000474564 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
COL12A1-206ENST00000474564 MEIS3Q99687 375 aa12.92□□□□□ -0.34
COL12A1-206ENST00000474564 RREB1Q92766 1687 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms