RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 NPHP1O15259 732 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 KCNQ3O43525 872 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 C7orf43Q8WVR3 580 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 SLX4Q8IY92 1834 aa15.44■□□□□ 0.06
EXOSC1-207ENST00000474309 KLRG2A4D1S0 409 aaPredicted RBP15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 PRPF40BQ6NWY9 871 aaKnown RBP15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 TNS4Q8IZW8 715 aa15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
EXOSC1-207ENST00000474309 HTATSF1O43719 755 aaKnown RBP15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 DDNO94850 711 aaPredicted RBP15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 ZNF652Q9Y2D9 606 aa15.42■□□□□ 0.06
EXOSC1-207ENST00000474309 IQCA1LA6NCM1 817 aa15.41■□□□□ 0.06
EXOSC1-207ENST00000474309 NPR1P16066 1061 aa15.41■□□□□ 0.06
EXOSC1-207ENST00000474309 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
EXOSC1-207ENST00000474309 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
EXOSC1-207ENST00000474309 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
EXOSC1-207ENST00000474309 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
EXOSC1-207ENST00000474309 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
EXOSC1-207ENST00000474309 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
EXOSC1-207ENST00000474309 SCN4AP35499 1836 aa15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 BCORQ6W2J9 1755 aa15.38■□□□□ 0.05
EXOSC1-207ENST00000474309 PRAMEF22A3QJZ6 481 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 PIP4K2AP48426 406 aaPredicted RBP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 TAF7Q15545 349 aaPredicted RBP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 MCM10Q7L590 875 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 TAF1DQ9H5J8 278 aaPredicted RBP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
EXOSC1-207ENST00000474309 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
EXOSC1-207ENST00000474309 ERVV-1B6SEH8 477 aa15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 FZD9O00144 591 aa15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
EXOSC1-207ENST00000474309 CAPN15O75808 1086 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 HLFQ16534 295 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 SYNE4Q8N205 404 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 NYXQ9GZU5 481 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 ZNF277Q9NRM2 450 aaPredicted RBP15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 CNTNAP1P78357 1384 aa15.33■□□□□ 0.04
EXOSC1-207ENST00000474309 TMEM88BA6NKF7 163 aa15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 IARSP41252 1262 aaKnown RBP15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 CRY2Q49AN0 593 aa15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 PSMD1Q99460 953 aa15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 PRDM10Q9NQV6 1147 aa15.32■□□□□ 0.04
EXOSC1-207ENST00000474309 EPHX2P34913 555 aa15.31■□□□□ 0.04
EXOSC1-207ENST00000474309 FAM177BA6PVY3 158 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 NEFMP07197 916 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 GPC2Q8N158 579 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 JDP2Q8WYK2 163 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 ZNF541Q9H0D2 1346 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
EXOSC1-207ENST00000474309 FOXN1O15353 648 aa15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 MIS18AQ9NYP9 233 aa15.29■□□□□ 0.04
EXOSC1-207ENST00000474309 MAP3K15Q6ZN16 1313 aa15.28■□□□□ 0.04
EXOSC1-207ENST00000474309 VEGFBP49765 207 aa15.28■□□□□ 0.04
EXOSC1-207ENST00000474309 WBP1LQ9NX94 342 aa15.28■□□□□ 0.04
EXOSC1-207ENST00000474309 NUP98P52948 1817 aa15.28■□□□□ 0.04
EXOSC1-207ENST00000474309 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
EXOSC1-207ENST00000474309 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
EXOSC1-207ENST00000474309 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.04
EXOSC1-207ENST00000474309 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
EXOSC1-207ENST00000474309 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.04
EXOSC1-207ENST00000474309 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
EXOSC1-207ENST00000474309 IBTKQ9P2D0 1353 aaPredicted RBP15.26■□□□□ 0.03
EXOSC1-207ENST00000474309 RNF123Q5XPI4 1314 aa15.26■□□□□ 0.03
EXOSC1-207ENST00000474309 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms