RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 LMNB1P20700 586 aa20.5■□□□□ 0.87
CLIC3-201ENST00000473911 KLRG1Q96E93 195 aa20.5■□□□□ 0.87
CLIC3-201ENST00000473911 ZNF219Q9P2Y4 722 aaPredicted RBP20.5■□□□□ 0.87
CLIC3-201ENST00000473911 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
CLIC3-201ENST00000473911 SCN7AQ01118 1682 aa20.5■□□□□ 0.87
CLIC3-201ENST00000473911 TIAM2Q8IVF5 1701 aa20.5■□□□□ 0.87
CLIC3-201ENST00000473911 POTECB2RU33 542 aa20.49■□□□□ 0.87
CLIC3-201ENST00000473911 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
CLIC3-201ENST00000473911 LMOD3Q0VAK6 560 aa20.49■□□□□ 0.87
CLIC3-201ENST00000473911 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
CLIC3-201ENST00000473911 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
CLIC3-201ENST00000473911 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
CLIC3-201ENST00000473911 EIF4A1P60842 406 aaKnown RBP20.48■□□□□ 0.87
CLIC3-201ENST00000473911 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
CLIC3-201ENST00000473911 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
CLIC3-201ENST00000473911 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
CLIC3-201ENST00000473911 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
CLIC3-201ENST00000473911 PDE6BP35913 854 aa20.47■□□□□ 0.87
CLIC3-201ENST00000473911 TMPOP42166 694 aaKnown RBP20.47■□□□□ 0.87
CLIC3-201ENST00000473911 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
CLIC3-201ENST00000473911 ZNF622Q969S3 477 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLIC3-201ENST00000473911 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
CLIC3-201ENST00000473911 C21orf2O43822 256 aa20.46■□□□□ 0.87
CLIC3-201ENST00000473911 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
CLIC3-201ENST00000473911 ST5P78524 1137 aa20.46■□□□□ 0.87
CLIC3-201ENST00000473911 NEUROD2Q15784 382 aa20.46■□□□□ 0.87
CLIC3-201ENST00000473911 COL13A1Q5TAT6 717 aaPredicted RBP20.46■□□□□ 0.87
CLIC3-201ENST00000473911 JMYQ8N9B5 988 aa20.46■□□□□ 0.87
CLIC3-201ENST00000473911 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
CLIC3-201ENST00000473911 RRP7AQ9Y3A4 280 aaKnown RBP20.46■□□□□ 0.87
CLIC3-201ENST00000473911 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
CLIC3-201ENST00000473911 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
CLIC3-201ENST00000473911 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
CLIC3-201ENST00000473911 SLX4Q8IY92 1834 aa20.44■□□□□ 0.86
CLIC3-201ENST00000473911 CACNA1SQ13698 1873 aa20.44■□□□□ 0.86
CLIC3-201ENST00000473911 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
CLIC3-201ENST00000473911 SMC1BQ8NDV3 1235 aa20.44■□□□□ 0.86
CLIC3-201ENST00000473911 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
CLIC3-201ENST00000473911 DLG5Q8TDM6 1919 aa20.44■□□□□ 0.86
CLIC3-201ENST00000473911 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
CLIC3-201ENST00000473911 VEGFAP15692 232 aaPredicted RBP20.43■□□□□ 0.86
CLIC3-201ENST00000473911 NIP7Q9Y221 180 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLIC3-201ENST00000473911 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
CLIC3-201ENST00000473911 RGL2O15211 777 aa20.42■□□□□ 0.86
CLIC3-201ENST00000473911 MYL6BP14649 208 aa20.42■□□□□ 0.86
CLIC3-201ENST00000473911 ADAMTS8Q9UP79 889 aa20.42■□□□□ 0.86
CLIC3-201ENST00000473911 DICER1Q9UPY3 1922 aaKnown RBP20.42■□□□□ 0.86
CLIC3-201ENST00000473911 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
CLIC3-201ENST00000473911 CAPN15O75808 1086 aa20.41■□□□□ 0.86
CLIC3-201ENST00000473911 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
CLIC3-201ENST00000473911 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
CLIC3-201ENST00000473911 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
CLIC3-201ENST00000473911 HLFQ16534 295 aa20.4■□□□□ 0.86
CLIC3-201ENST00000473911 TPTE2Q6XPS3 522 aa20.39■□□□□ 0.85
CLIC3-201ENST00000473911 LAS1LQ9Y4W2 734 aaKnown RBP20.39■□□□□ 0.85
CLIC3-201ENST00000473911 SRGNP10124 158 aa20.38■□□□□ 0.85
CLIC3-201ENST00000473911 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
CLIC3-201ENST00000473911 ERFEQ4G0M1 354 aa20.38■□□□□ 0.85
CLIC3-201ENST00000473911 LAMB4A4D0S4 1761 aa20.38■□□□□ 0.85
CLIC3-201ENST00000473911 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 GTF2E1P29083 439 aaPredicted RBP20.37■□□□□ 0.85
CLIC3-201ENST00000473911 STYK1Q6J9G0 422 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 PRPF40BQ6NWY9 871 aaKnown RBP20.37■□□□□ 0.85
CLIC3-201ENST00000473911 TTLL7Q6ZT98 887 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 CNKSR1Q969H4 720 aa20.37■□□□□ 0.85
CLIC3-201ENST00000473911 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
CLIC3-201ENST00000473911 ZBTB3Q9H5J0 574 aa20.36■□□□□ 0.85
CLIC3-201ENST00000473911 TRIM35Q9UPQ4 493 aa20.36■□□□□ 0.85
CLIC3-201ENST00000473911 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
CLIC3-201ENST00000473911 OLFM4Q6UX06 510 aa20.35■□□□□ 0.85
CLIC3-201ENST00000473911 TNS4Q8IZW8 715 aa20.35■□□□□ 0.85
CLIC3-201ENST00000473911 ARFGEF2Q9Y6D5 1785 aa20.35■□□□□ 0.85
CLIC3-201ENST00000473911 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
CLIC3-201ENST00000473911 NYXQ9GZU5 481 aa20.34■□□□□ 0.85
CLIC3-201ENST00000473911 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
CLIC3-201ENST00000473911 LTBP3Q9NS15 1303 aa20.33■□□□□ 0.85
CLIC3-201ENST00000473911 CHL1O00533 1208 aa20.33■□□□□ 0.85
CLIC3-201ENST00000473911 GPTP24298 496 aa20.33■□□□□ 0.85
CLIC3-201ENST00000473911 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
CLIC3-201ENST00000473911 NECTIN2Q92692 538 aa20.33■□□□□ 0.85
CLIC3-201ENST00000473911 NPR1P16066 1061 aa20.32■□□□□ 0.84
CLIC3-201ENST00000473911 PDIA6Q15084 440 aa20.31■□□□□ 0.84
CLIC3-201ENST00000473911 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
CLIC3-201ENST00000473911 APAF1O14727 1248 aa20.3■□□□□ 0.84
CLIC3-201ENST00000473911 ANXA1P04083 346 aa20.3■□□□□ 0.84
CLIC3-201ENST00000473911 KRT24Q2M2I5 525 aa20.3■□□□□ 0.84
CLIC3-201ENST00000473911 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
CLIC3-201ENST00000473911 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
CLIC3-201ENST00000473911 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
CLIC3-201ENST00000473911 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
CLIC3-201ENST00000473911 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
CLIC3-201ENST00000473911 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
CLIC3-201ENST00000473911 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
CLIC3-201ENST00000473911 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
CLIC3-201ENST00000473911 LRP10Q7Z4F1 713 aa20.28■□□□□ 0.84
CLIC3-201ENST00000473911 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms