RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 MLLT1Q03111 559 aaPredicted RBP22.18■■□□□ 1.14
HPS4-210ENST00000473782 MTHFSDQ2M296 383 aaKnown RBP22.18■■□□□ 1.14
HPS4-210ENST00000473782 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
HPS4-210ENST00000473782 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
HPS4-210ENST00000473782 STARD3NLO95772 234 aa22.17■■□□□ 1.14
HPS4-210ENST00000473782 SOGA3Q5TF21 947 aa22.17■■□□□ 1.14
HPS4-210ENST00000473782 OLFM4Q6UX06 510 aa22.17■■□□□ 1.14
HPS4-210ENST00000473782 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
HPS4-210ENST00000473782 CNBD1Q8NA66 436 aa22.16■■□□□ 1.14
HPS4-210ENST00000473782 POLR3GLQ9BT43 218 aa22.16■■□□□ 1.14
HPS4-210ENST00000473782 ZNF277Q9NRM2 450 aaPredicted RBP22.16■■□□□ 1.14
HPS4-210ENST00000473782 CLEC11AQ9Y240 323 aa22.16■■□□□ 1.14
HPS4-210ENST00000473782 CCDC85CA6NKD9 419 aa22.15■■□□□ 1.14
HPS4-210ENST00000473782 FMR1Q06787 632 aaKnown RBP eCLIP22.15■■□□□ 1.14
HPS4-210ENST00000473782 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
HPS4-210ENST00000473782 CACNA1SQ13698 1873 aa22.15■■□□□ 1.14
HPS4-210ENST00000473782 THSD7BQ9C0I4 1608 aa22.14■■□□□ 1.14
HPS4-210ENST00000473782 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
HPS4-210ENST00000473782 FZD9O00144 591 aa22.14■■□□□ 1.13
HPS4-210ENST00000473782 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
HPS4-210ENST00000473782 FKBP4Q02790 459 aaKnown RBP eCLIP22.14■■□□□ 1.13
HPS4-210ENST00000473782 SETDB2Q96T68 719 aa22.14■■□□□ 1.13
HPS4-210ENST00000473782 HEG1Q9ULI3 1381 aa22.13■■□□□ 1.13
HPS4-210ENST00000473782 KLRG2A4D1S0 409 aaPredicted RBP22.13■■□□□ 1.13
HPS4-210ENST00000473782 A1BGP04217 495 aa22.13■■□□□ 1.13
HPS4-210ENST00000473782 HMOX1P09601 288 aa22.13■■□□□ 1.13
HPS4-210ENST00000473782 CCDC93Q567U6 631 aa22.13■■□□□ 1.13
HPS4-210ENST00000473782 DDX21Q9NR30 783 aaKnown RBP eCLIP22.13■■□□□ 1.13
HPS4-210ENST00000473782 TNRC18O15417 2968 aaPredicted RBP22.12■■□□□ 1.13
HPS4-210ENST00000473782 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
HPS4-210ENST00000473782 ST5P78524 1137 aa22.11■■□□□ 1.13
HPS4-210ENST00000473782 ABT1Q9ULW3 272 aaKnown RBP22.11■■□□□ 1.13
HPS4-210ENST00000473782 ZNF790Q6PG37 636 aa22.1■■□□□ 1.13
HPS4-210ENST00000473782 SNED1Q8TER0 1413 aa22.1■■□□□ 1.13
HPS4-210ENST00000473782 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
HPS4-210ENST00000473782 CST9Q5W186 159 aa22.09■■□□□ 1.13
HPS4-210ENST00000473782 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
HPS4-210ENST00000473782 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
HPS4-210ENST00000473782 CAPNS2Q96L46 248 aa22.09■■□□□ 1.13
HPS4-210ENST00000473782 LTBP1Q14766 1721 aa22.09■■□□□ 1.13
HPS4-210ENST00000473782 NPR1P16066 1061 aa22.08■■□□□ 1.13
HPS4-210ENST00000473782 CYP4F22Q6NT55 531 aa22.08■■□□□ 1.13
HPS4-210ENST00000473782 TEX13AQ9BXU3 409 aaPredicted RBP22.08■■□□□ 1.13
HPS4-210ENST00000473782 TSKSQ9UJT2 592 aa22.08■■□□□ 1.13
HPS4-210ENST00000473782 COL4A5P29400 1685 aa22.07■■□□□ 1.12
HPS4-210ENST00000473782 IARSP41252 1262 aaKnown RBP22.07■■□□□ 1.12
HPS4-210ENST00000473782 GPC2Q8N158 579 aa22.07■■□□□ 1.12
HPS4-210ENST00000473782 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
HPS4-210ENST00000473782 GPR101Q96P66 508 aaPredicted RBP22.07■■□□□ 1.12
HPS4-210ENST00000473782 BCORQ6W2J9 1755 aa22.06■■□□□ 1.12
HPS4-210ENST00000473782 KCNQ3O43525 872 aa22.05■■□□□ 1.12
HPS4-210ENST00000473782 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
HPS4-210ENST00000473782 RTKN2Q8IZC4 609 aa22.05■■□□□ 1.12
HPS4-210ENST00000473782 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
HPS4-210ENST00000473782 NPHP1O15259 732 aa22.03■■□□□ 1.12
HPS4-210ENST00000473782 AOC2O75106 756 aa22.03■■□□□ 1.12
HPS4-210ENST00000473782 SCNN1DP51172 638 aa22.03■■□□□ 1.12
HPS4-210ENST00000473782 AMER1Q5JTC6 1135 aaPredicted RBP22.03■■□□□ 1.12
HPS4-210ENST00000473782 NBPF5PQ86XG9 351 aaPredicted RBP22.03■■□□□ 1.12
HPS4-210ENST00000473782 MCOLN1Q9GZU1 580 aa22.03■■□□□ 1.12
HPS4-210ENST00000473782 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
HPS4-210ENST00000473782 SIPA1L3O60292 1781 aaPredicted RBP22.02■■□□□ 1.12
HPS4-210ENST00000473782 TRAF5O00463 557 aa22.02■■□□□ 1.12
HPS4-210ENST00000473782 EPS15P42566 896 aa22.02■■□□□ 1.12
HPS4-210ENST00000473782 CLEC4GQ6UXB4 293 aa22.02■■□□□ 1.12
HPS4-210ENST00000473782 TLL2Q9Y6L7 1015 aa22.02■■□□□ 1.12
HPS4-210ENST00000473782 ECE1P42892 770 aa22.01■■□□□ 1.11
HPS4-210ENST00000473782 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
HPS4-210ENST00000473782 FMNL2Q96PY5 1086 aa22■■□□□ 1.11
HPS4-210ENST00000473782 PSMD1Q99460 953 aa22■■□□□ 1.11
HPS4-210ENST00000473782 MAP2K2P36507 400 aa21.99■■□□□ 1.11
HPS4-210ENST00000473782 GRM1Q13255 1194 aa21.99■■□□□ 1.11
HPS4-210ENST00000473782 SLC51AQ86UW1 340 aa21.99■■□□□ 1.11
HPS4-210ENST00000473782 BEGAINQ9BUH8 593 aa21.99■■□□□ 1.11
HPS4-210ENST00000473782 PAXIP1Q6ZW49 1069 aaPredicted RBP21.98■■□□□ 1.11
HPS4-210ENST00000473782 GJA3Q9Y6H8 435 aa21.98■■□□□ 1.11
HPS4-210ENST00000473782 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
HPS4-210ENST00000473782 TEFQ10587 303 aa21.97■■□□□ 1.11
HPS4-210ENST00000473782 TPTE2Q6XPS3 522 aa21.97■■□□□ 1.11
HPS4-210ENST00000473782 GNAT3A8MTJ3 354 aa21.96■■□□□ 1.11
HPS4-210ENST00000473782 HSPA5P11021 654 aaKnown RBP21.96■■□□□ 1.11
HPS4-210ENST00000473782 ALDH1B1P30837 517 aa21.96■■□□□ 1.11
HPS4-210ENST00000473782 SAPCD2Q86UD0 394 aa21.96■■□□□ 1.11
HPS4-210ENST00000473782 KNSTRNQ9Y448 316 aa21.96■■□□□ 1.11
HPS4-210ENST00000473782 PDE4DIPQ5VU43 2346 aa21.95■■□□□ 1.1
HPS4-210ENST00000473782 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
HPS4-210ENST00000473782 DIAPH1O60610 1272 aaKnown RBP21.95■■□□□ 1.1
HPS4-210ENST00000473782 CRY2Q49AN0 593 aa21.95■■□□□ 1.1
HPS4-210ENST00000473782 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
HPS4-210ENST00000473782 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
HPS4-210ENST00000473782 JDP2Q8WYK2 163 aa21.95■■□□□ 1.1
HPS4-210ENST00000473782 CASP8AP2Q9UKL3 1982 aa21.94■■□□□ 1.1
HPS4-210ENST00000473782 EIF6P56537 245 aaKnown RBP21.94■■□□□ 1.1
HPS4-210ENST00000473782 USP50Q70EL3 339 aaPredicted RBP21.94■■□□□ 1.1
HPS4-210ENST00000473782 NPM2Q86SE8 214 aaKnown RBP21.94■■□□□ 1.1
HPS4-210ENST00000473782 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
HPS4-210ENST00000473782 TRPM7Q96QT4 1865 aa21.94■■□□□ 1.1
HPS4-210ENST00000473782 FAM177BA6PVY3 158 aa21.93■■□□□ 1.1
HPS4-210ENST00000473782 HLFQ16534 295 aa21.93■■□□□ 1.1
HPS4-210ENST00000473782 ABCC12Q96J65 1359 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms