RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 TSGA10IPQ3SY00 556 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 GRIPAP1Q4V328 841 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 RNF187Q5TA31 235 aaPredicted RBP5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 DESI1Q6ICB0 168 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 LYPD8Q6UX82 237 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 CHPF2Q9P2E5 772 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 MAGEC2Q9UBF1 373 aaPredicted RBP5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 VTI1BQ9UEU0 232 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 FAN1Q9Y2M0 1017 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 EFCAB6Q5THR3 1501 aa5.57□□□□□ -1.52
UBE2D4-210ENST00000473007 CLTCQ00610 1675 aaKnown RBP5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 C19orf67A6NJJ6 358 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 SFI1A8K8P3 1242 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 PLCB3Q01970 1234 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 BMS1Q14692 1282 aaKnown RBP5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 PACS2Q86VP3 889 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 RETREG3Q86VR2 466 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 MORC4Q8TE76 937 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 MKNK1Q9BUB5 465 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 INPP5FQ9Y2H2 1132 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 COL4A3BPQ9Y5P4 624 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 MRPL42Q9Y6G3 142 aaKnown RBP5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 ABCC3O15438 1527 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 CEP152O94986 1710 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 PZPP20742 1482 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 RIMS1Q86UR5 1692 aaKnown RBP5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 NAIPQ13075 1403 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 PIK3C2BO00750 1634 aa5.56□□□□□ -1.52
UBE2D4-210ENST00000473007 SPHKAPQ2M3C7 1700 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 SMAPO00193 183 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 GALR2O43603 387 aaPredicted RBP5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 PTCD1O75127 700 aaKnown RBP5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 PEX14O75381 377 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 LGR5O75473 907 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 FAM13AO94988 1023 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 MAPK8P45983 427 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 FUT2Q10981 343 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 PSMD2Q13200 908 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 HSP90AB2PQ58FF8 381 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 CCDC102BQ68D86 513 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 HELQQ8TDG4 1101 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 CITED4Q96RK1 184 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 IFT57Q9NWB7 429 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 RBM19Q9Y4C8 960 aaKnown RBP5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 PTPRKQ15262 1439 aa5.55□□□□□ -1.52
UBE2D4-210ENST00000473007 E9PCH4 1651 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 NLRP1Q9C000 1473 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 CCDC194A0A1B0GVG4 234 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 TRIM6-TRIM34B2RNG4 842 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 NDUFB5O43674 189 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 STK10O94804 968 aaKnown RBP5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 WEE1P30291 646 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 GTF2IP78347 998 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 EHHADHQ08426 723 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 PDE3BQ13370 1112 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 FKBP5Q13451 457 aaPredicted RBP5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 PLEKHG6Q3KR16 790 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 FILIP1Q7Z7B0 1213 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 MCF2L2Q86YR7 1114 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 SMC5Q8IY18 1101 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 HINFPQ9BQA5 517 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 DDX41Q9UJV9 622 aaKnown RBP5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 WWC3Q9ULE0 1092 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 PCDHB9Q9Y5E1 797 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 EMILIN1Q9Y6C2 1016 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 KANK1Q14678 1352 aa5.54□□□□□ -1.52
UBE2D4-210ENST00000473007 KIF1BO60333 1816 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 MYO3AQ8NEV4 1616 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 UBAP1LF5GYI3 381 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 HAX1O00165 279 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 ATMINO43313 823 aaPredicted RBP5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 XRCC5P13010 732 aaKnown RBP5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 NFE2L2Q16236 605 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 VPS37DQ86XT2 251 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 RPUSD2Q8IZ73 545 aaKnown RBP5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 ZNF654Q8IZM8 581 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 TPCN2Q8NHX9 752 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 COL26A1Q96A83 441 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 MRFAP1L1Q96HT8 127 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 PURBQ96QR8 312 aaKnown RBP5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 PRKD2Q9BZL6 878 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 IRF2BPLQ9H1B7 796 aa5.53□□□□□ -1.52
UBE2D4-210ENST00000473007 POLR1AO95602 1720 aaPredicted RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 MED1Q15648 1581 aaPredicted RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 F12P00748 615 aaPredicted RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 IGHA2P01877 340 aa5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 FGRP09769 529 aa5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 ATP6V1AP38606 617 aa5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 RACK1P63244 317 aaKnown RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 IRX6P78412 446 aaPredicted RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 SWT1Q5T5J6 900 aaKnown RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 TMC1Q8TDI8 760 aa5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 GPSM3Q9Y4H4 160 aa5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 CFAP65Q6ZU64 1925 aaKnown RBP5.52□□□□□ -1.53
UBE2D4-210ENST00000473007 PLA2R1Q13018 1463 aa5.51□□□□□ -1.53
UBE2D4-210ENST00000473007 UBR1Q8IWV7 1749 aa5.51□□□□□ -1.53
UBE2D4-210ENST00000473007 PTPRTO14522 1441 aa5.51□□□□□ -1.53
UBE2D4-210ENST00000473007 NOS1P29475 1434 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms