RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-208	ENST00000473003	PUS7	Q96PZ0	661 aa	Known RBP	11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	GGNBP2	Q9H3C7	697 aa		11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	ANKRD26	Q9UPS8	1709 aa		11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	BCOR	Q6W2J9	1755 aa		11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	CUL9	Q8IWT3	2517 aa		11.28	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	MKI67	P46013	3256 aa	Known RBP	11.27	□□□□□ -0.6
RAPGEF4-208	ENST00000473003	CELF2	O95319	508 aa	Known RBP	11.27	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	HSP90AB1	P08238	724 aa	Known RBP	11.27	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	CABP4	P57796	275 aa		11.27	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	ZIC5	Q96T25	663 aa		11.27	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	CACNA1S	Q13698	1873 aa		11.27	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	FYB1	O15117	783 aa		11.26	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	LMOD1	P29536	600 aa	Predicted RBP	11.26	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	PRR5L	Q6MZQ0	368 aa		11.26	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	C7orf43	Q8WVR3	580 aa		11.26	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	EYA1	Q99502	592 aa		11.26	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SRGN	P10124	158 aa		11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SCNN1D	P51172	638 aa		11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	AKAP4	Q5JQC9	854 aa		11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	USP50	Q70EL3	339 aa	Predicted RBP	11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	DNAJC10	Q8IXB1	793 aa		11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	EMILIN1	Q9Y6C2	1016 aa		11.25	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	CCDC24	Q8N4L8	307 aa		11.24	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SLC17A8	Q8NDX2	589 aa		11.24	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	MASTL	Q96GX5	879 aa		11.24	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SCN7A	Q01118	1682 aa		11.24	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SCN11A	Q9UI33	1791 aa		11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	CYP19A1	P11511	503 aa	Predicted RBP	11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	IARS	P41252	1262 aa	Known RBP	11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	EPS15	P42566	896 aa		11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	PKN2	Q16513	984 aa	Known RBP	11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	L3MBTL2	Q969R5	705 aa		11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	ZBTB1	Q9Y2K1	713 aa		11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	GJA3	Q9Y6H8	435 aa		11.23	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	SZT2	Q5T011	3432 aa		11.22	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	TBC1D9B	Q66K14	1250 aa		11.22	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	RNF186	Q9NXI6	227 aa		11.22	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	KIF20B	Q96Q89	1820 aa		11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	COL4A5	P29400	1685 aa		11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	TRPA1	O75762	1119 aa		11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	EIF6	P56537	245 aa	Known RBP	11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	RTKN2	Q8IZC4	609 aa		11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	CNBD1	Q8NA66	436 aa		11.21	□□□□□ -0.61
RAPGEF4-208	ENST00000473003	WASHC2A	Q641Q2	1341 aa		11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	FAM155A	B1AL88	458 aa	Predicted RBP	11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	NFATC2IP	Q8NCF5	419 aa		11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	JDP2	Q8WYK2	163 aa		11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	ZNF408	Q9H9D4	720 aa		11.2	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	SNED1	Q8TER0	1413 aa		11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	HUNK	P57058	714 aa		11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	ST5	P78524	1137 aa		11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	OLFM4	Q6UX06	510 aa		11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	SYNE4	Q8N205	404 aa		11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	ADARB2	Q9NS39	739 aa	Known RBP	11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	COLQ	Q9Y215	455 aa	Predicted RBP	11.19	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	PITPNM2	Q9BZ72	1349 aa		11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	ST20-MTHFS	A0A0A6YYL1	179 aa		11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	PPM1G	O15355	546 aa	Predicted RBP	11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	MTHFS	P49914	203 aa		11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	KIF23	Q02241	960 aa	Predicted RBP	11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	COL6A3	P12111	3177 aa		11.18	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	HTT	P42858	3142 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003		A0A087WZG4	1122 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	NPHP1	O15259	732 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	NPR1	P16066	1061 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	RGMB	Q6NW40	437 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	PSMD1	Q99460	953 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	PGAP2	Q9UHJ9	254 aa		11.17	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	EIF5	P55010	431 aa	Known RBP	11.16	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.16	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	CCDC102A	Q96A19	550 aa		11.16	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	GPRC5D	Q9NZD1	345 aa		11.16	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	TRIOBP	Q9H2D6	2365 aa		11.16	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	CANX	P27824	592 aa	Known RBP	11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	MNX1	P50219	401 aa	Predicted RBP	11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	AMOT	Q4VCS5	1084 aa		11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	C1orf141	Q5JVX7	400 aa		11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	CARD11	Q9BXL7	1154 aa		11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	HDAC9	Q9UKV0	1011 aa		11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	AKAP11	Q9UKA4	1901 aa		11.15	□□□□□ -0.62
RAPGEF4-208	ENST00000473003	MRC1	P22897	1456 aa		11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	EIF4A2	Q14240	407 aa	Known RBP	11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	CDC37L1	Q7L3B6	337 aa		11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	ZC3H15	Q8WU90	426 aa	Known RBP	11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	CSRNP1	Q96S65	589 aa		11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	SETDB2	Q96T68	719 aa		11.14	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	KLRG2	A4D1S0	409 aa	Predicted RBP	11.13	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	SLC10A3	P09131	477 aa		11.13	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.13	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	POTEF	A5A3E0	1075 aa		11.12	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	ZNF157	P51786	506 aa	Predicted RBP	11.12	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	VSIG10	Q8N0Z9	540 aa		11.12	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	LARGE2	Q8N3Y3	721 aa		11.12	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	TESK2	Q96S53	571 aa		11.12	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	CDHR2	Q9BYE9	1310 aa		11.11	□□□□□ -0.63
RAPGEF4-208	ENST00000473003	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms