RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
HDAC1-205ENST00000472928 FLT4P35916 1363 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 ZMYND10O75800 440 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 GYS1P13807 737 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 PDIA6Q15084 440 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 TMEM132AQ24JP5 1023 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
HDAC1-205ENST00000472928 C2orf72A6NCS6 295 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
HDAC1-205ENST00000472928 PLCG2P16885 1265 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
HDAC1-205ENST00000472928 CNGB1Q14028 1251 aaPredicted RBP8.6□□□□□ -1.03
HDAC1-205ENST00000472928 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 PANK3Q9H999 370 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 SLC24A3Q9HC58 644 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 TMOD3Q9NYL9 352 aa8.6□□□□□ -1.03
HDAC1-205ENST00000472928 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
HDAC1-205ENST00000472928 TNRC6CQ9HCJ0 1690 aaKnown RBP8.59□□□□□ -1.03
HDAC1-205ENST00000472928 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
HDAC1-205ENST00000472928 SLC34A2O95436 690 aa8.59□□□□□ -1.03
HDAC1-205ENST00000472928 DDR1Q08345 913 aa8.59□□□□□ -1.03
HDAC1-205ENST00000472928 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
HDAC1-205ENST00000472928 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
HDAC1-205ENST00000472928 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
HDAC1-205ENST00000472928 SBF1O95248 1867 aa8.59□□□□□ -1.03
HDAC1-205ENST00000472928 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 KDM6AO15550 1401 aaPredicted RBP8.58□□□□□ -1.04
HDAC1-205ENST00000472928 GABBR2O75899 941 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 PHKG2P15735 406 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
HDAC1-205ENST00000472928 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
HDAC1-205ENST00000472928 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 PARP3Q9Y6F1 533 aa8.58□□□□□ -1.04
HDAC1-205ENST00000472928 G3V3G9 751 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 CCER2I3L3R5 266 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 CHRNA5P30532 468 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 RASSF7Q02833 373 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 KNSTRNQ9Y448 316 aa8.57□□□□□ -1.04
HDAC1-205ENST00000472928 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
HDAC1-205ENST00000472928 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
HDAC1-205ENST00000472928 ZNF831Q5JPB2 1677 aa8.56□□□□□ -1.04
HDAC1-205ENST00000472928 RFC4P35249 363 aa8.56□□□□□ -1.04
HDAC1-205ENST00000472928 IFNL2Q8IZJ0 200 aa8.56□□□□□ -1.04
HDAC1-205ENST00000472928 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
HDAC1-205ENST00000472928 EYA1Q99502 592 aa8.56□□□□□ -1.04
HDAC1-205ENST00000472928 SRP68Q9UHB9 627 aaKnown RBP8.56□□□□□ -1.04
HDAC1-205ENST00000472928 NPC1L1Q9UHC9 1359 aa8.56□□□□□ -1.04
HDAC1-205ENST00000472928 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
HDAC1-205ENST00000472928 GLTPD2A6NH11 291 aa8.55□□□□□ -1.04
HDAC1-205ENST00000472928 PER1O15534 1290 aaPredicted RBP8.55□□□□□ -1.04
HDAC1-205ENST00000472928 CC2D1BQ5T0F9 858 aaKnown RBP8.55□□□□□ -1.04
HDAC1-205ENST00000472928 GPIHBP1Q8IV16 184 aa8.55□□□□□ -1.04
HDAC1-205ENST00000472928 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
HDAC1-205ENST00000472928 POTECB2RU33 542 aa8.54□□□□□ -1.04
HDAC1-205ENST00000472928 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
HDAC1-205ENST00000472928 VEGFAP15692 232 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-205ENST00000472928 RALBP1Q15311 655 aa8.54□□□□□ -1.04
HDAC1-205ENST00000472928 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
HDAC1-205ENST00000472928 YTHDC1Q96MU7 727 aaKnown RBP8.54□□□□□ -1.04
HDAC1-205ENST00000472928 CARD14Q9BXL6 1004 aa8.54□□□□□ -1.04
HDAC1-205ENST00000472928 COLQQ9Y215 455 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-205ENST00000472928 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
HDAC1-205ENST00000472928 ERVV-2B6SEH9 535 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 FOXN1O15353 648 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 LMNB1P20700 586 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 TM4SF1P30408 202 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
HDAC1-205ENST00000472928 NEUROD2Q15784 382 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
HDAC1-205ENST00000472928 NFKBIEO00221 500 aa8.52□□□□□ -1.05
HDAC1-205ENST00000472928 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
HDAC1-205ENST00000472928 MRS2Q9HD23 443 aa8.52□□□□□ -1.05
HDAC1-205ENST00000472928 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
HDAC1-205ENST00000472928 PDE4DIPQ5VU43 2346 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 SEC24BO95487 1268 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 EIF4A2Q14240 407 aaKnown RBP8.51□□□□□ -1.05
HDAC1-205ENST00000472928 CCDC184Q52MB2 194 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 INTS5Q6P9B9 1019 aaKnown RBP8.51□□□□□ -1.05
HDAC1-205ENST00000472928 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 POLKQ9UBT6 870 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
HDAC1-205ENST00000472928 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
HDAC1-205ENST00000472928 TJP1Q07157 1748 aa8.5□□□□□ -1.05
HDAC1-205ENST00000472928 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
HDAC1-205ENST00000472928 SLC39A7Q92504 469 aa8.5□□□□□ -1.05
HDAC1-205ENST00000472928 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 CARMIL3Q8ND23 1372 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 GPR37O15354 613 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms