RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
SGCE-210ENST00000472326 GAS6Q14393 721 aa13.14□□□□□ -0.31
SGCE-210ENST00000472326 NLRP8Q86W28 1048 aa13.14□□□□□ -0.31
SGCE-210ENST00000472326 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 ABHD17AQ96GS6 310 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 CNTNAP3BQ96NU0 1288 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 CNTNAP3Q9BZ76 1288 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
SGCE-210ENST00000472326 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
SGCE-210ENST00000472326 BNIP3LO60238 219 aa13.12□□□□□ -0.31
SGCE-210ENST00000472326 RTN1Q16799 776 aa13.12□□□□□ -0.31
SGCE-210ENST00000472326 USTQ9Y2C2 406 aa13.12□□□□□ -0.31
SGCE-210ENST00000472326 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
SGCE-210ENST00000472326 NAA30Q147X3 362 aaPredicted RBP13.11□□□□□ -0.31
SGCE-210ENST00000472326 SUSD3Q96L08 255 aa13.11□□□□□ -0.31
SGCE-210ENST00000472326 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
SGCE-210ENST00000472326 PCDHGC4Q9Y5F7 938 aa13.11□□□□□ -0.31
SGCE-210ENST00000472326 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
SGCE-210ENST00000472326 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
SGCE-210ENST00000472326 SSFA2P28290 1259 aa13.09□□□□□ -0.31
SGCE-210ENST00000472326 SAP130Q9H0E3 1048 aa13.09□□□□□ -0.31
SGCE-210ENST00000472326 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
SGCE-210ENST00000472326 HCN2Q9UL51 889 aa13.09□□□□□ -0.31
SGCE-210ENST00000472326 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
SGCE-210ENST00000472326 KHNYNO15037 678 aaKnown RBP13.08□□□□□ -0.32
SGCE-210ENST00000472326 DGKZQ13574 1117 aa13.08□□□□□ -0.32
SGCE-210ENST00000472326 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
SGCE-210ENST00000472326 COX20Q5RI15 118 aa13.07□□□□□ -0.32
SGCE-210ENST00000472326 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
SGCE-210ENST00000472326 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
SGCE-210ENST00000472326 WIPF1O43516 503 aa13.06□□□□□ -0.32
SGCE-210ENST00000472326 MAPTP10636 758 aaKnown RBP13.06□□□□□ -0.32
SGCE-210ENST00000472326 PHLDB3Q6NSJ2 640 aa13.06□□□□□ -0.32
SGCE-210ENST00000472326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
SGCE-210ENST00000472326 ATXN7L1Q9ULK2 861 aaPredicted RBP13.06□□□□□ -0.32
SGCE-210ENST00000472326 PHF24Q9UPV7 400 aa13.06□□□□□ -0.32
SGCE-210ENST00000472326 TNP2Q05952 138 aa13.05□□□□□ -0.32
SGCE-210ENST00000472326 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
SGCE-210ENST00000472326 MYO19Q96H55 970 aa13.05□□□□□ -0.32
SGCE-210ENST00000472326 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
SGCE-210ENST00000472326 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
SGCE-210ENST00000472326 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 MX2P20592 715 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 FGFR3P22607 806 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 COL26A1Q96A83 441 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
SGCE-210ENST00000472326 CD33P20138 364 aa13.03□□□□□ -0.32
SGCE-210ENST00000472326 CTBSQ01459 385 aa13.03□□□□□ -0.32
SGCE-210ENST00000472326 TYRO3Q06418 890 aa13.02□□□□□ -0.33
SGCE-210ENST00000472326 C11orf91Q3C1V1 193 aa13.02□□□□□ -0.33
SGCE-210ENST00000472326 BTLAQ7Z6A9 289 aa13.02□□□□□ -0.33
SGCE-210ENST00000472326 TGFBR3LH3BV60 316 aa13.01□□□□□ -0.33
SGCE-210ENST00000472326 GRIN2CQ14957 1233 aa13.01□□□□□ -0.33
SGCE-210ENST00000472326 HIF1AQ16665 826 aa13.01□□□□□ -0.33
SGCE-210ENST00000472326 IGF1RP08069 1367 aa13□□□□□ -0.33
SGCE-210ENST00000472326 C2CD2LO14523 706 aa13□□□□□ -0.33
SGCE-210ENST00000472326 EFSO43281 561 aa13□□□□□ -0.33
SGCE-210ENST00000472326 ADAMTS2O95450 1211 aa13□□□□□ -0.33
SGCE-210ENST00000472326 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
SGCE-210ENST00000472326 IFT43Q96FT9 208 aa13□□□□□ -0.33
SGCE-210ENST00000472326 BRD7Q9NPI1 651 aa13□□□□□ -0.33
SGCE-210ENST00000472326 FAM26DQ5JW98 314 aa12.99□□□□□ -0.33
SGCE-210ENST00000472326 DMGDHQ9UI17 866 aaKnown RBP12.99□□□□□ -0.33
SGCE-210ENST00000472326 TNFRSF10BO14763 440 aa12.98□□□□□ -0.33
SGCE-210ENST00000472326 BMP4P12644 408 aa12.98□□□□□ -0.33
SGCE-210ENST00000472326 SRSF11Q05519 484 aaKnown RBP12.98□□□□□ -0.33
SGCE-210ENST00000472326 MARK1Q9P0L2 795 aa12.98□□□□□ -0.33
SGCE-210ENST00000472326 IER5Q5VY09 327 aa12.97□□□□□ -0.33
SGCE-210ENST00000472326 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
SGCE-210ENST00000472326 MICAL2O94851 1124 aa12.96□□□□□ -0.33
SGCE-210ENST00000472326 IDH3AP50213 366 aa12.96□□□□□ -0.33
SGCE-210ENST00000472326 LORP23490 312 aaPredicted RBP12.95□□□□□ -0.34
SGCE-210ENST00000472326 PDE4CQ08493 712 aa12.95□□□□□ -0.34
SGCE-210ENST00000472326 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
SGCE-210ENST00000472326 TREML1Q86YW5 311 aa12.95□□□□□ -0.34
SGCE-210ENST00000472326 GTF3C2Q8WUA4 911 aaPredicted RBP12.95□□□□□ -0.34
SGCE-210ENST00000472326 SLURP2P0DP57 97 aa12.94□□□□□ -0.34
SGCE-210ENST00000472326 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
SGCE-210ENST00000472326 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
SGCE-210ENST00000472326 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
SGCE-210ENST00000472326 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
SGCE-210ENST00000472326 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
SGCE-210ENST00000472326 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
SGCE-210ENST00000472326 KCNH4Q9UQ05 1017 aa12.93□□□□□ -0.34
SGCE-210ENST00000472326 DNMT3AQ9Y6K1 912 aaPredicted RBP12.93□□□□□ -0.34
SGCE-210ENST00000472326 GRNP28799 593 aaKnown RBP12.92□□□□□ -0.34
SGCE-210ENST00000472326 INPP5BP32019 993 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 MAP2K3P46734 347 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 ZSCAN1Q8NBB4 408 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 ACDQ96AP0 544 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 SLC30A3Q99726 388 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 STIM2Q9P246 746 aa12.92□□□□□ -0.34
SGCE-210ENST00000472326 OPLAHO14841 1288 aa12.91□□□□□ -0.34
SGCE-210ENST00000472326 ZBTB39O15060 712 aa12.91□□□□□ -0.34
SGCE-210ENST00000472326 ABL1P00519 1130 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms