RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
CLRN1-205ENST00000472224 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
CLRN1-205ENST00000472224 STARD3NLO95772 234 aa15.56■□□□□ 0.08
CLRN1-205ENST00000472224 RFC4P35249 363 aa15.56■□□□□ 0.08
CLRN1-205ENST00000472224 RASSF7Q02833 373 aa15.56■□□□□ 0.08
CLRN1-205ENST00000472224 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
CLRN1-205ENST00000472224 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
CLRN1-205ENST00000472224 ZNF330Q9Y3S2 320 aaPredicted RBP15.56■□□□□ 0.08
CLRN1-205ENST00000472224 COL15A1P39059 1388 aa15.55■□□□□ 0.08
CLRN1-205ENST00000472224 APAF1O14727 1248 aa15.55■□□□□ 0.08
CLRN1-205ENST00000472224 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
CLRN1-205ENST00000472224 CHRNA5P30532 468 aa15.55■□□□□ 0.08
CLRN1-205ENST00000472224 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
CLRN1-205ENST00000472224 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
CLRN1-205ENST00000472224 SOS1Q07889 1333 aaPredicted RBP15.54■□□□□ 0.08
CLRN1-205ENST00000472224 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
CLRN1-205ENST00000472224 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
CLRN1-205ENST00000472224 DDR1Q08345 913 aa15.54■□□□□ 0.08
CLRN1-205ENST00000472224 TEX13AQ9BXU3 409 aaPredicted RBP15.54■□□□□ 0.08
CLRN1-205ENST00000472224 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
CLRN1-205ENST00000472224 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
CLRN1-205ENST00000472224 GLTPD2A6NH11 291 aa15.53■□□□□ 0.08
CLRN1-205ENST00000472224 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
CLRN1-205ENST00000472224 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
CLRN1-205ENST00000472224 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
CLRN1-205ENST00000472224 SCN7AQ01118 1682 aa15.52■□□□□ 0.08
CLRN1-205ENST00000472224 POTECB2RU33 542 aa15.52■□□□□ 0.08
CLRN1-205ENST00000472224 FOXN1O15353 648 aa15.52■□□□□ 0.08
CLRN1-205ENST00000472224 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
CLRN1-205ENST00000472224 USP42Q9H9J4 1324 aaKnown RBP15.51■□□□□ 0.07
CLRN1-205ENST00000472224 ZPR1O75312 459 aa15.51■□□□□ 0.07
CLRN1-205ENST00000472224 A1BGP04217 495 aa15.51■□□□□ 0.07
CLRN1-205ENST00000472224 FKBP8Q14318 412 aa15.51■□□□□ 0.07
CLRN1-205ENST00000472224 NPM2Q86SE8 214 aaKnown RBP15.51■□□□□ 0.07
CLRN1-205ENST00000472224 FAM9BQ8IZU0 186 aa15.51■□□□□ 0.07
CLRN1-205ENST00000472224 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
CLRN1-205ENST00000472224 USP16Q9Y5T5 823 aa15.5■□□□□ 0.07
CLRN1-205ENST00000472224 NRXN2Q9P2S2 1712 aa15.5■□□□□ 0.07
CLRN1-205ENST00000472224 BCORQ6W2J9 1755 aa15.49■□□□□ 0.07
CLRN1-205ENST00000472224 EIF4A1P60842 406 aaKnown RBP15.49■□□□□ 0.07
CLRN1-205ENST00000472224 MKRN4PQ13434 485 aaPredicted RBP15.49■□□□□ 0.07
CLRN1-205ENST00000472224 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
CLRN1-205ENST00000472224 DICER1Q9UPY3 1922 aaKnown RBP15.49■□□□□ 0.07
CLRN1-205ENST00000472224 LMNB1P20700 586 aa15.48■□□□□ 0.07
CLRN1-205ENST00000472224 FAM161AQ3B820 660 aa15.48■□□□□ 0.07
CLRN1-205ENST00000472224 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
CLRN1-205ENST00000472224 A0A087WZG4 1122 aa15.47■□□□□ 0.07
CLRN1-205ENST00000472224 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
CLRN1-205ENST00000472224 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
CLRN1-205ENST00000472224 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
CLRN1-205ENST00000472224 IL6STP40189 918 aaPredicted RBP15.46■□□□□ 0.07
CLRN1-205ENST00000472224 EIF5P55010 431 aaKnown RBP15.46■□□□□ 0.07
CLRN1-205ENST00000472224 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
CLRN1-205ENST00000472224 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
CLRN1-205ENST00000472224 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
CLRN1-205ENST00000472224 TBC1D2BQ9UPU7 963 aa15.46■□□□□ 0.07
CLRN1-205ENST00000472224 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
CLRN1-205ENST00000472224 TM4SF1P30408 202 aa15.45■□□□□ 0.06
CLRN1-205ENST00000472224 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
CLRN1-205ENST00000472224 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
CLRN1-205ENST00000472224 FER1L6Q2WGJ9 1857 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 NFKBIEO00221 500 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 CHL1O00533 1208 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 KRT24Q2M2I5 525 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
CLRN1-205ENST00000472224 BICDL1Q6ZP65 573 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
CLRN1-205ENST00000472224 NECTIN2Q92692 538 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
CLRN1-205ENST00000472224 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 MYL6BP14649 208 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
CLRN1-205ENST00000472224 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 IFT57Q9NWB7 429 aa15.43■□□□□ 0.06
CLRN1-205ENST00000472224 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
CLRN1-205ENST00000472224 ANKRD31Q8N7Z5 1873 aa15.42■□□□□ 0.06
CLRN1-205ENST00000472224 TNRC18O15417 2968 aaPredicted RBP15.41■□□□□ 0.06
CLRN1-205ENST00000472224 COL11A2P13942 1736 aaPredicted RBP15.41■□□□□ 0.06
CLRN1-205ENST00000472224 CAMTA2O94983 1202 aa15.41■□□□□ 0.06
CLRN1-205ENST00000472224 CTCFP49711 727 aaPredicted RBP15.41■□□□□ 0.06
CLRN1-205ENST00000472224 GNAI1P63096 354 aa15.41■□□□□ 0.06
CLRN1-205ENST00000472224 NFIXQ14938 502 aa15.41■□□□□ 0.06
CLRN1-205ENST00000472224 ABHD8Q96I13 439 aa15.41■□□□□ 0.06
CLRN1-205ENST00000472224 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
CLRN1-205ENST00000472224 NUP98P52948 1817 aa15.4■□□□□ 0.06
CLRN1-205ENST00000472224 LBX1P52954 281 aa15.4■□□□□ 0.06
CLRN1-205ENST00000472224 WWC1Q8IX03 1113 aa15.4■□□□□ 0.06
CLRN1-205ENST00000472224 PASKQ96RG2 1323 aa15.4■□□□□ 0.06
CLRN1-205ENST00000472224 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 ANXA1P04083 346 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 VEGFBP49765 207 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 KIF6Q6ZMV9 814 aa15.39■□□□□ 0.05
CLRN1-205ENST00000472224 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms