RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
SPC25-203ENST00000472216 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
SPC25-203ENST00000472216 TTC21BQ7Z4L5 1316 aa14.42□□□□□ -0.1
SPC25-203ENST00000472216 RBBP6Q7Z6E9 1792 aaKnown RBP14.42□□□□□ -0.1
SPC25-203ENST00000472216 SCN11AQ9UI33 1791 aa14.42□□□□□ -0.1
SPC25-203ENST00000472216 ZNF157P51786 506 aaPredicted RBP14.42□□□□□ -0.1
SPC25-203ENST00000472216 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
SPC25-203ENST00000472216 EPS15P42566 896 aa14.41□□□□□ -0.1
SPC25-203ENST00000472216 NOM1Q5C9Z4 860 aaKnown RBP14.41□□□□□ -0.1
SPC25-203ENST00000472216 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
SPC25-203ENST00000472216 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
SPC25-203ENST00000472216 FZD9O00144 591 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 GPR25O00155 361 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 PDZRN3Q9UPQ7 1066 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 PCDH11XQ9BZA7 1347 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 PCDH11YQ9BZA8 1340 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
SPC25-203ENST00000472216 EYSQ5T1H1 3165 aa14.39□□□□□ -0.11
SPC25-203ENST00000472216 PRUNE2Q8WUY3 3088 aa14.39□□□□□ -0.11
SPC25-203ENST00000472216 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
SPC25-203ENST00000472216 GJA3Q9Y6H8 435 aa14.38□□□□□ -0.11
SPC25-203ENST00000472216 RPTORQ8N122 1335 aa14.38□□□□□ -0.11
SPC25-203ENST00000472216 FKTNO75072 461 aa14.37□□□□□ -0.11
SPC25-203ENST00000472216 ALYREFQ86V81 257 aaKnown RBP14.37□□□□□ -0.11
SPC25-203ENST00000472216 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
SPC25-203ENST00000472216 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
SPC25-203ENST00000472216 ITGAEP38570 1179 aa14.36□□□□□ -0.11
SPC25-203ENST00000472216 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
SPC25-203ENST00000472216 ARMC5Q96C12 935 aa14.36□□□□□ -0.11
SPC25-203ENST00000472216 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
SPC25-203ENST00000472216 SERPINB2P05120 415 aa14.35□□□□□ -0.11
SPC25-203ENST00000472216 SCNN1DP51172 638 aa14.35□□□□□ -0.11
SPC25-203ENST00000472216 CDC37L1Q7L3B6 337 aa14.35□□□□□ -0.11
SPC25-203ENST00000472216 ZNF277Q9NRM2 450 aaPredicted RBP14.35□□□□□ -0.11
SPC25-203ENST00000472216 NR2E3Q9Y5X4 410 aa14.35□□□□□ -0.11
SPC25-203ENST00000472216 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
SPC25-203ENST00000472216 SLC10A3P09131 477 aa14.34□□□□□ -0.11
SPC25-203ENST00000472216 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
SPC25-203ENST00000472216 IP6K1Q92551 441 aa14.34□□□□□ -0.11
SPC25-203ENST00000472216 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
SPC25-203ENST00000472216 TMOD3Q9NYL9 352 aa14.34□□□□□ -0.11
SPC25-203ENST00000472216 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
SPC25-203ENST00000472216 ZPR1O75312 459 aa14.33□□□□□ -0.12
SPC25-203ENST00000472216 PDE6BP35913 854 aa14.33□□□□□ -0.12
SPC25-203ENST00000472216 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
SPC25-203ENST00000472216 C2orf69Q8N8R5 385 aa14.33□□□□□ -0.12
SPC25-203ENST00000472216 HCN4Q9Y3Q4 1203 aa14.33□□□□□ -0.12
SPC25-203ENST00000472216 ITGB4P16144 1822 aa14.32□□□□□ -0.12
SPC25-203ENST00000472216 FKBP4Q02790 459 aaKnown RBP eCLIP14.32□□□□□ -0.12
SPC25-203ENST00000472216 NFIXQ14938 502 aa14.32□□□□□ -0.12
SPC25-203ENST00000472216 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
SPC25-203ENST00000472216 FAM208AQ9UK61 1670 aaKnown RBP14.31□□□□□ -0.12
SPC25-203ENST00000472216 TATP17735 454 aaPredicted RBP14.31□□□□□ -0.12
SPC25-203ENST00000472216 CCDC93Q567U6 631 aa14.31□□□□□ -0.12
SPC25-203ENST00000472216 PRPF40BQ6NWY9 871 aaKnown RBP14.31□□□□□ -0.12
SPC25-203ENST00000472216 JDP2Q8WYK2 163 aa14.31□□□□□ -0.12
SPC25-203ENST00000472216 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
SPC25-203ENST00000472216 PKD1L2Q7Z442 2459 aa14.3□□□□□ -0.12
SPC25-203ENST00000472216 CYP27B1O15528 508 aa14.3□□□□□ -0.12
SPC25-203ENST00000472216 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
SPC25-203ENST00000472216 GBA2Q9HCG7 927 aaPredicted RBP14.3□□□□□ -0.12
SPC25-203ENST00000472216 ATG3Q9NT62 314 aa14.3□□□□□ -0.12
SPC25-203ENST00000472216 USPL1Q5W0Q7 1092 aa14.29□□□□□ -0.12
SPC25-203ENST00000472216 OTOP1Q7RTM1 612 aa14.29□□□□□ -0.12
SPC25-203ENST00000472216 ZC3H15Q8WU90 426 aaKnown RBP14.29□□□□□ -0.12
SPC25-203ENST00000472216 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
SPC25-203ENST00000472216 LTN1O94822 1766 aa14.29□□□□□ -0.12
SPC25-203ENST00000472216 CACNA1GO43497 2377 aa14.29□□□□□ -0.12
SPC25-203ENST00000472216 IARSP41252 1262 aaKnown RBP14.28□□□□□ -0.12
SPC25-203ENST00000472216 SLC4A9Q96Q91 983 aa14.28□□□□□ -0.12
SPC25-203ENST00000472216 BRIP1Q9BX63 1249 aa14.28□□□□□ -0.12
SPC25-203ENST00000472216 PTPN22Q9Y2R2 807 aa14.28□□□□□ -0.12
SPC25-203ENST00000472216 CARMIL3Q8ND23 1372 aa14.27□□□□□ -0.12
SPC25-203ENST00000472216 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
SPC25-203ENST00000472216 HTATIP2Q9BUP3 242 aa14.27□□□□□ -0.13
SPC25-203ENST00000472216 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
SPC25-203ENST00000472216 KDRP35968 1356 aa14.26□□□□□ -0.13
SPC25-203ENST00000472216 LRIT3Q3SXY7 679 aa14.26□□□□□ -0.13
SPC25-203ENST00000472216 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
SPC25-203ENST00000472216 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
SPC25-203ENST00000472216 WTIPA6NIX2 430 aaPredicted RBP14.25□□□□□ -0.13
SPC25-203ENST00000472216 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
SPC25-203ENST00000472216 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
SPC25-203ENST00000472216 RTKN2Q8IZC4 609 aa14.25□□□□□ -0.13
SPC25-203ENST00000472216 COL26A1Q96A83 441 aa14.25□□□□□ -0.13
SPC25-203ENST00000472216 ZNF333Q96JL9 665 aa14.25□□□□□ -0.13
SPC25-203ENST00000472216 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
SPC25-203ENST00000472216 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
SPC25-203ENST00000472216 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
SPC25-203ENST00000472216 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
SPC25-203ENST00000472216 C7orf43Q8WVR3 580 aa14.23□□□□□ -0.13
SPC25-203ENST00000472216 GPRC5DQ9NZD1 345 aa14.23□□□□□ -0.13
SPC25-203ENST00000472216 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
SPC25-203ENST00000472216 NBPF6Q5VWK0 638 aa14.22□□□□□ -0.13
SPC25-203ENST00000472216 NBPF4Q96M43 638 aa14.22□□□□□ -0.13
SPC25-203ENST00000472216 GUCD1Q96NT3 240 aa14.22□□□□□ -0.13
SPC25-203ENST00000472216 C1QTNF1Q9BXJ1 281 aa14.22□□□□□ -0.13
SPC25-203ENST00000472216 SLX4Q8IY92 1834 aa14.22□□□□□ -0.13
SPC25-203ENST00000472216 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms