RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
COL4A3-205ENST00000471862 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
COL4A3-205ENST00000471862 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
COL4A3-205ENST00000471862 CACNA1SQ13698 1873 aa15.15■□□□□ 0.02
COL4A3-205ENST00000471862 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-205ENST00000471862 HLFQ16534 295 aa15.15■□□□□ 0.02
COL4A3-205ENST00000471862 FER1L6Q2WGJ9 1857 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 CCDC88AQ3V6T2 1871 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 KIF3CO14782 793 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 ST5P78524 1137 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 SLX4Q8IY92 1834 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 MAP3K15Q6ZN16 1313 aa15.14■□□□□ 0.01
COL4A3-205ENST00000471862 ERVV-1B6SEH8 477 aa15.13■□□□□ 0.01
COL4A3-205ENST00000471862 PRELPP51888 382 aa15.13■□□□□ 0.01
COL4A3-205ENST00000471862 RASSF7Q02833 373 aa15.13■□□□□ 0.01
COL4A3-205ENST00000471862 TTLL7Q6ZT98 887 aa15.13■□□□□ 0.01
COL4A3-205ENST00000471862 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL4A3-205ENST00000471862 NFKBIEO00221 500 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 CHL1O00533 1208 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 SRGNP10124 158 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 PDIA6Q15084 440 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 NBPF5PQ86XG9 351 aaPredicted RBP15.12■□□□□ 0.01
COL4A3-205ENST00000471862 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL4A3-205ENST00000471862 RNF181Q9P0P0 153 aa15.12■□□□□ 0.01
COL4A3-205ENST00000471862 DICER1Q9UPY3 1922 aaKnown RBP15.11■□□□□ 0.01
COL4A3-205ENST00000471862 KLRG2A4D1S0 409 aaPredicted RBP15.11■□□□□ 0.01
COL4A3-205ENST00000471862 MYL6BP14649 208 aa15.11■□□□□ 0.01
COL4A3-205ENST00000471862 NGEFQ8N5V2 710 aa15.11■□□□□ 0.01
COL4A3-205ENST00000471862 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
COL4A3-205ENST00000471862 TIAM2Q8IVF5 1701 aa15.11■□□□□ 0.01
COL4A3-205ENST00000471862 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
COL4A3-205ENST00000471862 NPHP1O15259 732 aa15.1■□□□□ 0.01
COL4A3-205ENST00000471862 TPTE2Q6XPS3 522 aa15.1■□□□□ 0.01
COL4A3-205ENST00000471862 MASTLQ96GX5 879 aa15.1■□□□□ 0.01
COL4A3-205ENST00000471862 ZC3H4Q9UPT8 1303 aaKnown RBP15.1■□□□□ 0.01
COL4A3-205ENST00000471862 IBTKQ9P2D0 1353 aaPredicted RBP15.1■□□□□ 0.01
COL4A3-205ENST00000471862 LMNB1P20700 586 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 ABCC12Q96J65 1359 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
COL4A3-205ENST00000471862 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0.01
COL4A3-205ENST00000471862 C21orf2O43822 256 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 EIF2S2P20042 333 aaKnown RBP15.08■□□□□ 0
COL4A3-205ENST00000471862 KRT24Q2M2I5 525 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 PROSER3Q2NL68 480 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 PRPF40BQ6NWY9 871 aaKnown RBP15.08■□□□□ 0
COL4A3-205ENST00000471862 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
COL4A3-205ENST00000471862 ZBTB3Q9H5J0 574 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 NMRK2Q9NPI5 230 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 LTBP3Q9NS15 1303 aa15.08■□□□□ 0
COL4A3-205ENST00000471862 FAM177BA6PVY3 158 aa15.07■□□□□ 0
COL4A3-205ENST00000471862 ANXA1P04083 346 aa15.07■□□□□ 0
COL4A3-205ENST00000471862 CCDC184Q52MB2 194 aa15.07■□□□□ 0
COL4A3-205ENST00000471862 ZNF34Q8IZ26 560 aa15.07■□□□□ 0
COL4A3-205ENST00000471862 C7orf43Q8WVR3 580 aa15.07■□□□□ 0
COL4A3-205ENST00000471862 APAF1O14727 1248 aa15.06■□□□□ 0
COL4A3-205ENST00000471862 ZNF853P0CG23 659 aa15.06■□□□□ 0
COL4A3-205ENST00000471862 NPR1P16066 1061 aa15.06■□□□□ 0
COL4A3-205ENST00000471862 CFAP44Q96MT7 982 aa15.06■□□□□ 0
COL4A3-205ENST00000471862 NYXQ9GZU5 481 aa15.06■□□□□ 0
COL4A3-205ENST00000471862 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
COL4A3-205ENST00000471862 NTSR2O95665 410 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 HOXB7P09629 217 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 GPTP24298 496 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 CRY2Q49AN0 593 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 SUSD4Q5VX71 490 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 NUTM1Q86Y26 1132 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 DDX21Q9NR30 783 aaKnown RBP eCLIP15.05■□□□□ -0
COL4A3-205ENST00000471862 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
COL4A3-205ENST00000471862 KDM2BQ8NHM5 1336 aa15.05■□□□□ -0
COL4A3-205ENST00000471862 SNED1Q8TER0 1413 aa15.04■□□□□ -0
COL4A3-205ENST00000471862 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
COL4A3-205ENST00000471862 TOMM70O94826 608 aa15.04■□□□□ -0
COL4A3-205ENST00000471862 ERFEQ4G0M1 354 aa15.04■□□□□ -0
COL4A3-205ENST00000471862 SOGA3Q5TF21 947 aa15.04■□□□□ -0
COL4A3-205ENST00000471862 HSPA6P17066 643 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
COL4A3-205ENST00000471862 PARP10Q53GL7 1025 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 COPS6Q7L5N1 327 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 NECTIN2Q92692 538 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 MBIPQ9NS73 344 aa15.03■□□□□ -0
COL4A3-205ENST00000471862 CEP350Q5VT06 3117 aa15.02■□□□□ -0
COL4A3-205ENST00000471862 GLTPD2A6NH11 291 aa15.02■□□□□ -0
COL4A3-205ENST00000471862 XAGE3Q8WTP9 111 aa15.02■□□□□ -0
COL4A3-205ENST00000471862 IFT57Q9NWB7 429 aa15.02■□□□□ -0
COL4A3-205ENST00000471862 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
COL4A3-205ENST00000471862 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
COL4A3-205ENST00000471862 LAMB2P55268 1798 aa15.01□□□□□ -0.01
COL4A3-205ENST00000471862 HOXA10P31260 410 aaPredicted RBP15.01□□□□□ -0.01
COL4A3-205ENST00000471862 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
COL4A3-205ENST00000471862 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms