RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 SRGNP10124 158 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 PDIA6Q15084 440 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 HLFQ16534 295 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
POLR1A-206ENST00000471427 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 CNKSR1Q969H4 720 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 RRP7AQ9Y3A4 280 aaKnown RBP12.58□□□□□ -0.4
POLR1A-206ENST00000471427 MAP3K15Q6ZN16 1313 aa12.58□□□□□ -0.4
POLR1A-206ENST00000471427 KDM3BQ7LBC6 1761 aa12.57□□□□□ -0.4
POLR1A-206ENST00000471427 KIF3CO14782 793 aa12.57□□□□□ -0.4
POLR1A-206ENST00000471427 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
POLR1A-206ENST00000471427 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
POLR1A-206ENST00000471427 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
POLR1A-206ENST00000471427 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
POLR1A-206ENST00000471427 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
POLR1A-206ENST00000471427 NPHP1O15259 732 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 HOXB7P09629 217 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 LMNB1P20700 586 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
POLR1A-206ENST00000471427 MYL6BP14649 208 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 NPR1P16066 1061 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 SOGA3Q5TF21 947 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
POLR1A-206ENST00000471427 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 ZNF526Q8TF50 670 aaPredicted RBP12.55□□□□□ -0.4
POLR1A-206ENST00000471427 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
POLR1A-206ENST00000471427 ZNF316A6NFI3 1004 aaPredicted RBP12.54□□□□□ -0.4
POLR1A-206ENST00000471427 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
POLR1A-206ENST00000471427 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
POLR1A-206ENST00000471427 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
POLR1A-206ENST00000471427 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR1A-206ENST00000471427 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 NFKBIEO00221 500 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 APAF1O14727 1248 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 C21orf2O43822 256 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 TOMM70O94826 608 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
POLR1A-206ENST00000471427 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
POLR1A-206ENST00000471427 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 LTBP3Q9NS15 1303 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
POLR1A-206ENST00000471427 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
POLR1A-206ENST00000471427 PRELPP51888 382 aa12.52□□□□□ -0.41
POLR1A-206ENST00000471427 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
POLR1A-206ENST00000471427 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
POLR1A-206ENST00000471427 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
POLR1A-206ENST00000471427 SBF1O95248 1867 aa12.52□□□□□ -0.41
POLR1A-206ENST00000471427 ANKRD31Q8N7Z5 1873 aa12.52□□□□□ -0.41
POLR1A-206ENST00000471427 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
POLR1A-206ENST00000471427 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
POLR1A-206ENST00000471427 RASSF7Q02833 373 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
POLR1A-206ENST00000471427 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
POLR1A-206ENST00000471427 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 GNAI1P63096 354 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
POLR1A-206ENST00000471427 RIC1Q4ADV7 1423 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 NTSR2O95665 410 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 HSPA6P17066 643 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 GPTP24298 496 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 DPY19L2Q6NUT2 758 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
POLR1A-206ENST00000471427 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
POLR1A-206ENST00000471427 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
POLR1A-206ENST00000471427 NUP98P52948 1817 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 ANXA1P04083 346 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms