RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RUNDC1Q96C34 613 aa17.72■□□□□ 0.43
HMGN1-211ENST00000471260 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
HMGN1-211ENST00000471260 ERVV-1B6SEH8 477 aa17.71■□□□□ 0.43
HMGN1-211ENST00000471260 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
HMGN1-211ENST00000471260 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-211ENST00000471260 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
HMGN1-211ENST00000471260 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
HMGN1-211ENST00000471260 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
HMGN1-211ENST00000471260 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
HMGN1-211ENST00000471260 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
HMGN1-211ENST00000471260 ZNF622Q969S3 477 aaKnown RBP eCLIP17.69■□□□□ 0.42
HMGN1-211ENST00000471260 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
HMGN1-211ENST00000471260 KIF3CO14782 793 aa17.68■□□□□ 0.42
HMGN1-211ENST00000471260 RNF181Q9P0P0 153 aa17.68■□□□□ 0.42
HMGN1-211ENST00000471260 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
HMGN1-211ENST00000471260 MAP3K15Q6ZN16 1313 aa17.68■□□□□ 0.42
HMGN1-211ENST00000471260 SRGNP10124 158 aa17.67■□□□□ 0.42
HMGN1-211ENST00000471260 HLFQ16534 295 aa17.67■□□□□ 0.42
HMGN1-211ENST00000471260 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
HMGN1-211ENST00000471260 CCDC146Q8IYE0 955 aa17.67■□□□□ 0.42
HMGN1-211ENST00000471260 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
HMGN1-211ENST00000471260 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
HMGN1-211ENST00000471260 KLRG2A4D1S0 409 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-211ENST00000471260 CHL1O00533 1208 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 LMNB1P20700 586 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 NYXQ9GZU5 481 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 SBF1O95248 1867 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
HMGN1-211ENST00000471260 MYL6BP14649 208 aa17.65■□□□□ 0.42
HMGN1-211ENST00000471260 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
HMGN1-211ENST00000471260 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
HMGN1-211ENST00000471260 TRIM35Q9UPQ4 493 aa17.65■□□□□ 0.42
HMGN1-211ENST00000471260 TOMM70O94826 608 aa17.64■□□□□ 0.41
HMGN1-211ENST00000471260 NPR1P16066 1061 aa17.64■□□□□ 0.41
HMGN1-211ENST00000471260 RASSF7Q02833 373 aa17.64■□□□□ 0.41
HMGN1-211ENST00000471260 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-211ENST00000471260 GIGYF2Q6Y7W6 1299 aaKnown RBP17.63■□□□□ 0.41
HMGN1-211ENST00000471260 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
HMGN1-211ENST00000471260 LTBP3Q9NS15 1303 aa17.63■□□□□ 0.41
HMGN1-211ENST00000471260 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-211ENST00000471260 NFKBIEO00221 500 aa17.62■□□□□ 0.41
HMGN1-211ENST00000471260 C21orf2O43822 256 aa17.62■□□□□ 0.41
HMGN1-211ENST00000471260 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
HMGN1-211ENST00000471260 PDIA6Q15084 440 aa17.62■□□□□ 0.41
HMGN1-211ENST00000471260 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
HMGN1-211ENST00000471260 IBTKQ9P2D0 1353 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-211ENST00000471260 HOXB7P09629 217 aa17.61■□□□□ 0.41
HMGN1-211ENST00000471260 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
HMGN1-211ENST00000471260 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
HMGN1-211ENST00000471260 NMRK2Q9NPI5 230 aa17.61■□□□□ 0.41
HMGN1-211ENST00000471260 NUP98P52948 1817 aa17.61■□□□□ 0.41
HMGN1-211ENST00000471260 HSPA6P17066 643 aa17.6■□□□□ 0.41
HMGN1-211ENST00000471260 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
HMGN1-211ENST00000471260 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
HMGN1-211ENST00000471260 ZNF34Q8IZ26 560 aa17.6■□□□□ 0.41
HMGN1-211ENST00000471260 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
HMGN1-211ENST00000471260 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 PRELPP51888 382 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
HMGN1-211ENST00000471260 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
HMGN1-211ENST00000471260 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
HMGN1-211ENST00000471260 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
HMGN1-211ENST00000471260 FER1L6Q2WGJ9 1857 aa17.58■□□□□ 0.41
HMGN1-211ENST00000471260 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.41
HMGN1-211ENST00000471260 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
HMGN1-211ENST00000471260 GLTPD2A6NH11 291 aa17.58■□□□□ 0.4
HMGN1-211ENST00000471260 DPY19L2Q6NUT2 758 aa17.58■□□□□ 0.4
HMGN1-211ENST00000471260 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
HMGN1-211ENST00000471260 DDX21Q9NR30 783 aaKnown RBP eCLIP17.58■□□□□ 0.4
HMGN1-211ENST00000471260 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
HMGN1-211ENST00000471260 SLX4Q8IY92 1834 aa17.58■□□□□ 0.4
HMGN1-211ENST00000471260 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
HMGN1-211ENST00000471260 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
HMGN1-211ENST00000471260 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 APAF1O14727 1248 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 GPTP24298 496 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 ERFEQ4G0M1 354 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
HMGN1-211ENST00000471260 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 ZNF853P0CG23 659 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 FSTL1Q12841 308 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 PROSER3Q2NL68 480 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 COPS6Q7L5N1 327 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
HMGN1-211ENST00000471260 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
HMGN1-211ENST00000471260 NTSR2O95665 410 aa17.54■□□□□ 0.4
HMGN1-211ENST00000471260 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
HMGN1-211ENST00000471260 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
HMGN1-211ENST00000471260 GNAI1P63096 354 aa17.54■□□□□ 0.4
HMGN1-211ENST00000471260 GRIPAP1Q4V328 841 aa17.54■□□□□ 0.4
HMGN1-211ENST00000471260 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
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