RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
GPNMB-208ENST00000470994 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
GPNMB-208ENST00000470994 BTBD6Q96KE9 485 aa9.45□□□□□ -0.9
GPNMB-208ENST00000470994 SUV39H2Q9H5I1 410 aa9.45□□□□□ -0.9
GPNMB-208ENST00000470994 NDFIP2Q9NV92 336 aa9.45□□□□□ -0.9
GPNMB-208ENST00000470994 CDK11AQ9UQ88 783 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-208ENST00000470994 NUP153P49790 1475 aaKnown RBP9.45□□□□□ -0.9
GPNMB-208ENST00000470994 C1QTNF9BB2RNN3 333 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 C2CD2LO14523 706 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 BNIP3LO60238 219 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 USP4Q13107 963 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 TLR1Q15399 786 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
GPNMB-208ENST00000470994 C1orf216Q8TAB5 229 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 CFAP43Q8NDM7 1665 aa9.44□□□□□ -0.9
GPNMB-208ENST00000470994 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 NEO1Q92859 1461 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 AKNAQ7Z591 1439 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-208ENST00000470994 DGKGP49619 791 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 CTBSQ01459 385 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 PCDHGC4Q9Y5F7 938 aa9.43□□□□□ -0.9
GPNMB-208ENST00000470994 DENND4BO75064 1496 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-208ENST00000470994 NEURL1BA8MQ27 555 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 ADH6P28332 368 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 EFCAB2Q5VUJ9 269 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 CD163Q86VB7 1156 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-208ENST00000470994 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
GPNMB-208ENST00000470994 DOLKQ9UPQ8 538 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
GPNMB-208ENST00000470994 PLA2G4AP47712 749 aa9.41□□□□□ -0.9
GPNMB-208ENST00000470994 HSPA2P54652 639 aa9.41□□□□□ -0.9
GPNMB-208ENST00000470994 NLRP8Q86W28 1048 aa9.41□□□□□ -0.9
GPNMB-208ENST00000470994 PTPRMP28827 1452 aa9.4□□□□□ -0.9
GPNMB-208ENST00000470994 AVENQ9NQS1 362 aaPredicted RBP9.4□□□□□ -0.9
GPNMB-208ENST00000470994 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
GPNMB-208ENST00000470994 FANCAO15360 1455 aa9.4□□□□□ -0.91
GPNMB-208ENST00000470994 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
GPNMB-208ENST00000470994 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
GPNMB-208ENST00000470994 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
GPNMB-208ENST00000470994 MTMR14Q8NCE2 650 aa9.39□□□□□ -0.91
GPNMB-208ENST00000470994 ZCCHC2Q9C0B9 1178 aaKnown RBP9.39□□□□□ -0.91
GPNMB-208ENST00000470994 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
GPNMB-208ENST00000470994 KIF21BO75037 1637 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 ATXN7O15265 892 aaPredicted RBP9.38□□□□□ -0.91
GPNMB-208ENST00000470994 GPR37L1O60883 481 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 CHRNA4P43681 627 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 FBXO41Q8TF61 875 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 NIFKQ9BYG3 293 aaKnown RBP9.38□□□□□ -0.91
GPNMB-208ENST00000470994 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
GPNMB-208ENST00000470994 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
GPNMB-208ENST00000470994 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
GPNMB-208ENST00000470994 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
GPNMB-208ENST00000470994 KRTAP4-8Q9BYQ9 185 aa9.37□□□□□ -0.91
GPNMB-208ENST00000470994 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
GPNMB-208ENST00000470994 CEBPAP49715 358 aaPredicted RBP9.36□□□□□ -0.91
GPNMB-208ENST00000470994 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
GPNMB-208ENST00000470994 PLCH2O75038 1416 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 FMN1Q68DA7 1419 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 YEATS2Q9ULM3 1422 aa9.36□□□□□ -0.91
GPNMB-208ENST00000470994 SPDYE3A6NKU9 549 aa9.35□□□□□ -0.91
GPNMB-208ENST00000470994 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
GPNMB-208ENST00000470994 NEUROD2Q15784 382 aa9.35□□□□□ -0.91
GPNMB-208ENST00000470994 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-208ENST00000470994 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
GPNMB-208ENST00000470994 ZNF777Q9ULD5 760 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-208ENST00000470994 TATP17735 454 aaPredicted RBP9.34□□□□□ -0.91
GPNMB-208ENST00000470994 ATP4AP20648 1035 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 GATA4P43694 442 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 GJA3Q9Y6H8 435 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
GPNMB-208ENST00000470994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.34□□□□□ -0.91
GPNMB-208ENST00000470994 DCDC2BA2VCK2 349 aa9.33□□□□□ -0.92
GPNMB-208ENST00000470994 MAPTP10636 758 aaKnown RBP9.33□□□□□ -0.92
GPNMB-208ENST00000470994 GDF10P55107 478 aa9.33□□□□□ -0.92
GPNMB-208ENST00000470994 DOC2BQ14184 412 aa9.33□□□□□ -0.92
GPNMB-208ENST00000470994 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
GPNMB-208ENST00000470994 ARHGAP35Q9NRY4 1499 aa9.33□□□□□ -0.92
GPNMB-208ENST00000470994 A0A1W2PNR3 127 aa9.32□□□□□ -0.92
GPNMB-208ENST00000470994 KHNYNO15037 678 aaKnown RBP9.32□□□□□ -0.92
GPNMB-208ENST00000470994 INHAP05111 366 aa9.32□□□□□ -0.92
GPNMB-208ENST00000470994 CD33P20138 364 aa9.32□□□□□ -0.92
GPNMB-208ENST00000470994 TNP2Q05952 138 aa9.32□□□□□ -0.92
GPNMB-208ENST00000470994 CLIP1P30622 1438 aa9.31□□□□□ -0.92
GPNMB-208ENST00000470994 FAM157BP0CG42 384 aa9.31□□□□□ -0.92
GPNMB-208ENST00000470994 ZNF468Q5VIY5 522 aaPredicted RBP9.31□□□□□ -0.92
GPNMB-208ENST00000470994 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
GPNMB-208ENST00000470994 ZDHHC3Q9NYG2 299 aa9.31□□□□□ -0.92
GPNMB-208ENST00000470994 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms