RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
NXF3-205ENST00000470724 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
NXF3-205ENST00000470724 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
NXF3-205ENST00000470724 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
NXF3-205ENST00000470724 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
NXF3-205ENST00000470724 GPTP24298 496 aa12.42□□□□□ -0.42
NXF3-205ENST00000470724 TM4SF1P30408 202 aa12.42□□□□□ -0.42
NXF3-205ENST00000470724 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
NXF3-205ENST00000470724 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
NXF3-205ENST00000470724 HLFQ16534 295 aa12.42□□□□□ -0.42
NXF3-205ENST00000470724 CCDC30Q5VVM6 783 aa12.42□□□□□ -0.42
NXF3-205ENST00000470724 NBPF5PQ86XG9 351 aaPredicted RBP12.42□□□□□ -0.42
NXF3-205ENST00000470724 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
NXF3-205ENST00000470724 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
NXF3-205ENST00000470724 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
NXF3-205ENST00000470724 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 ST5P78524 1137 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 PDIA6Q15084 440 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
NXF3-205ENST00000470724 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
NXF3-205ENST00000470724 A0A0G2JLW4 131 aa12.4□□□□□ -0.42
NXF3-205ENST00000470724 CLEC4GQ6UXB4 293 aa12.4□□□□□ -0.42
NXF3-205ENST00000470724 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
NXF3-205ENST00000470724 C4AP0C0L4 1744 aa12.4□□□□□ -0.43
NXF3-205ENST00000470724 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
NXF3-205ENST00000470724 E9PSI1 815 aa12.39□□□□□ -0.43
NXF3-205ENST00000470724 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
NXF3-205ENST00000470724 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
NXF3-205ENST00000470724 DPEP1P16444 411 aa12.38□□□□□ -0.43
NXF3-205ENST00000470724 CHRNA5P30532 468 aa12.38□□□□□ -0.43
NXF3-205ENST00000470724 HSP90AB3PQ58FF7 597 aa12.38□□□□□ -0.43
NXF3-205ENST00000470724 TPTE2Q6XPS3 522 aa12.38□□□□□ -0.43
NXF3-205ENST00000470724 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
NXF3-205ENST00000470724 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
NXF3-205ENST00000470724 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 TGFB2P61812 414 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
NXF3-205ENST00000470724 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
NXF3-205ENST00000470724 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
NXF3-205ENST00000470724 H0YIN7 160 aa12.36□□□□□ -0.43
NXF3-205ENST00000470724 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
NXF3-205ENST00000470724 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
NXF3-205ENST00000470724 ATP5J2-PTCD1G3V325 749 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 PDE6BP35913 854 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 MYD88Q99836 296 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
NXF3-205ENST00000470724 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
NXF3-205ENST00000470724 RGL2O15211 777 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 VAMP4O75379 141 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
NXF3-205ENST00000470724 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
NXF3-205ENST00000470724 SUSD4Q5VX71 490 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
NXF3-205ENST00000470724 BRIP1Q9BX63 1249 aa12.34□□□□□ -0.43
NXF3-205ENST00000470724 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
NXF3-205ENST00000470724 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
NXF3-205ENST00000470724 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
NXF3-205ENST00000470724 G2E3Q7L622 706 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
NXF3-205ENST00000470724 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
NXF3-205ENST00000470724 FLIIQ13045 1269 aa12.32□□□□□ -0.44
NXF3-205ENST00000470724 NLRP10Q86W26 655 aa12.32□□□□□ -0.44
NXF3-205ENST00000470724 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
NXF3-205ENST00000470724 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
NXF3-205ENST00000470724 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
NXF3-205ENST00000470724 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
NXF3-205ENST00000470724 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
NXF3-205ENST00000470724 BCL2L13Q9BXK5 485 aa12.31□□□□□ -0.44
NXF3-205ENST00000470724 NTSR2O95665 410 aa12.3□□□□□ -0.44
NXF3-205ENST00000470724 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
NXF3-205ENST00000470724 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
NXF3-205ENST00000470724 SMC4Q9NTJ3 1288 aa12.3□□□□□ -0.44
NXF3-205ENST00000470724 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
NXF3-205ENST00000470724 COL24A1Q17RW2 1714 aa12.3□□□□□ -0.44
NXF3-205ENST00000470724 BCORQ6W2J9 1755 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms