RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 VRTNQ9H8Y1 702 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 USP3Q9Y6I4 520 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 WFS1O76024 890 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 GNASQ5JWF2 1037 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 LARP1Q6PKG0 1096 aaKnown RBP10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 TAS1R3Q7RTX0 852 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
PTP4A1-202ENST00000470661 RICTORQ6R327 1708 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 SIGLEC1Q9BZZ2 1709 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 MTUS2Q5JR59 1369 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 DKK1O94907 266 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 C4orf17Q53FE4 359 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 SIX5Q8N196 739 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 CDC42BPBQ9Y5S2 1711 aa10.55□□□□□ -0.72
PTP4A1-202ENST00000470661 A6NJY4 79 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L15C9J2P7 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L10C9JJH3 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L13C9JLJ4 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L12C9JPN9 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L11C9JVI0 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L21D6R901 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L18D6R9N7 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L22D6RA61 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L17D6RBQ6 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L19D6RCP7 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L20D6RJB6 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 BACH1O14867 736 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 CEBPAP49715 358 aaPredicted RBP10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 USP17L24Q0WX57 530 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 PTK7Q13308 1070 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 POGZQ7Z3K3 1410 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 TIMMDC1Q9NPL8 285 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 CFDP1Q9UEE9 299 aaPredicted RBP10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 SERPINA10Q9UK55 444 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 ERBB4Q15303 1308 aa10.54□□□□□ -0.72
PTP4A1-202ENST00000470661 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
PTP4A1-202ENST00000470661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
PTP4A1-202ENST00000470661 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
PTP4A1-202ENST00000470661 RHBDD1Q8TEB9 315 aa10.53□□□□□ -0.72
PTP4A1-202ENST00000470661 ITGA6P23229 1130 aa10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 MTFR1Q15390 333 aa10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 TBCELQ5QJ74 424 aa10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 TSEN2Q8NCE0 465 aaKnown RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 CUEDC1Q9NWM3 386 aaPredicted RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.73
PTP4A1-202ENST00000470661 CDC42BPAQ5VT25 1732 aa10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 EPHA4P54764 986 aa10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 DPYDQ12882 1025 aa10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 DYRK1BQ9Y463 629 aa10.51□□□□□ -0.73
PTP4A1-202ENST00000470661 FAM196BA6NMK8 535 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 CDK2AP1O14519 115 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 LGR5O75473 907 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 WDR44Q5JSH3 913 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 RIPOR1Q6ZS17 1223 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 ANKMY2Q8IV38 441 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 GPAMQ9HCL2 828 aa10.5□□□□□ -0.73
PTP4A1-202ENST00000470661 PTPRMP28827 1452 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 ARHGEF40Q8TER5 1519 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 CDC14CA4D256 554 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 HSPA2P54652 639 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 SEC13P55735 322 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 FOXK2Q01167 660 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 ZNF295-AS1Q8N0V1 137 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 IRF7Q92985 503 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 NIFKQ9BYG3 293 aaKnown RBP10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 ATP10AO60312 1499 aa10.49□□□□□ -0.73
PTP4A1-202ENST00000470661 MADDQ8WXG6 1647 aa10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 ADAMTSL3P82987 1691 aa10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 SRPK2P78362 688 aaKnown RBP10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 CABP1Q9NZU7 370 aa10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
PTP4A1-202ENST00000470661 PREX2Q70Z35 1606 aa10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 ARXQ96QS3 562 aa10.47□□□□□ -0.73
PTP4A1-202ENST00000470661 TSPAN10Q9H1Z9 355 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms