RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 QTRT2Q9H974 415 aaKnown RBP10.56□□□□□ -0.72
SSB-209ENST00000470621 A0A1W2PNR3 127 aa10.55□□□□□ -0.72
SSB-209ENST00000470621 GDF11O95390 407 aa10.55□□□□□ -0.72
SSB-209ENST00000470621 ARSJQ5FYB0 599 aaPredicted RBP10.55□□□□□ -0.72
SSB-209ENST00000470621 RNFT1Q5M7Z0 435 aa10.55□□□□□ -0.72
SSB-209ENST00000470621 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
SSB-209ENST00000470621 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
SSB-209ENST00000470621 RHPN1Q8TCX5 695 aa10.55□□□□□ -0.72
SSB-209ENST00000470621 BICDL1Q6ZP65 573 aa10.54□□□□□ -0.72
SSB-209ENST00000470621 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
SSB-209ENST00000470621 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
SSB-209ENST00000470621 HSH2DQ96JZ2 352 aa10.54□□□□□ -0.72
SSB-209ENST00000470621 H7C1W4 665 aa10.53□□□□□ -0.72
SSB-209ENST00000470621 SV2AQ7L0J3 742 aa10.53□□□□□ -0.72
SSB-209ENST00000470621 SVOPQ8N4V2 548 aa10.53□□□□□ -0.72
SSB-209ENST00000470621 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
SSB-209ENST00000470621 SSFA2P28290 1259 aa10.52□□□□□ -0.73
SSB-209ENST00000470621 C1orf53Q5VUE5 145 aa10.52□□□□□ -0.73
SSB-209ENST00000470621 NAA30Q147X3 362 aaPredicted RBP10.51□□□□□ -0.73
SSB-209ENST00000470621 EFHC2Q5JST6 749 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 LRRC69Q6ZNQ3 347 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 ZNF280CQ8ND82 737 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 VTI1AQ96AJ9 217 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 SAP130Q9H0E3 1048 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
SSB-209ENST00000470621 RTN1Q16799 776 aa10.5□□□□□ -0.73
SSB-209ENST00000470621 ZCCHC2Q9C0B9 1178 aaKnown RBP10.5□□□□□ -0.73
SSB-209ENST00000470621 KLK14Q9P0G3 267 aa10.5□□□□□ -0.73
SSB-209ENST00000470621 SEPT3Q9UH03 358 aa10.5□□□□□ -0.73
SSB-209ENST00000470621 HCN2Q9UL51 889 aa10.5□□□□□ -0.73
SSB-209ENST00000470621 GAS6Q14393 721 aa10.49□□□□□ -0.73
SSB-209ENST00000470621 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
SSB-209ENST00000470621 WHAMMQ8TF30 809 aa10.49□□□□□ -0.73
SSB-209ENST00000470621 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
SSB-209ENST00000470621 BCS1LQ9Y276 419 aa10.49□□□□□ -0.73
SSB-209ENST00000470621 BNIP3LO60238 219 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 DGKZQ13574 1117 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 COX20Q5RI15 118 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 NLRP8Q86W28 1048 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 ABHD17AQ96GS6 310 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
SSB-209ENST00000470621 DCDC2BA2VCK2 349 aa10.47□□□□□ -0.73
SSB-209ENST00000470621 MYO19Q96H55 970 aa10.47□□□□□ -0.73
SSB-209ENST00000470621 GJA3Q9Y6H8 435 aa10.47□□□□□ -0.73
SSB-209ENST00000470621 COL26A1Q96A83 441 aa10.46□□□□□ -0.73
SSB-209ENST00000470621 GPC6Q9Y625 555 aaPredicted RBP10.46□□□□□ -0.73
SSB-209ENST00000470621 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
SSB-209ENST00000470621 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
SSB-209ENST00000470621 C16orf46Q6P387 395 aa10.45□□□□□ -0.74
SSB-209ENST00000470621 ATXN7O15265 892 aaPredicted RBP10.44□□□□□ -0.74
SSB-209ENST00000470621 PCDHGC4Q9Y5F7 938 aa10.44□□□□□ -0.74
SSB-209ENST00000470621 DNMT3AQ9Y6K1 912 aaPredicted RBP10.44□□□□□ -0.74
SSB-209ENST00000470621 TNFRSF10BO14763 440 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 KHNYNO15037 678 aaKnown RBP10.43□□□□□ -0.74
SSB-209ENST00000470621 IRS1P35568 1242 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 FIGNL1Q6PIW4 674 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 STRN4Q9NRL3 753 aa10.43□□□□□ -0.74
SSB-209ENST00000470621 FAM157BP0CG42 384 aa10.42□□□□□ -0.74
SSB-209ENST00000470621 MAPTP10636 758 aaKnown RBP10.42□□□□□ -0.74
SSB-209ENST00000470621 MARSP56192 900 aaKnown RBP10.42□□□□□ -0.74
SSB-209ENST00000470621 TNP2Q05952 138 aa10.42□□□□□ -0.74
SSB-209ENST00000470621 TYRO3Q06418 890 aa10.42□□□□□ -0.74
SSB-209ENST00000470621 FOXR1Q6PIV2 292 aa10.42□□□□□ -0.74
SSB-209ENST00000470621 DMGDHQ9UI17 866 aaKnown RBP10.42□□□□□ -0.74
SSB-209ENST00000470621 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 EFSO43281 561 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 ADAMTS2O95450 1211 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 CD33P20138 364 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 GRIN2CQ14957 1233 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 C11orf91Q3C1V1 193 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 BTLAQ7Z6A9 289 aa10.41□□□□□ -0.74
SSB-209ENST00000470621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSB-209ENST00000470621 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
SSB-209ENST00000470621 FGFR3P22607 806 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 CTBSQ01459 385 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 SRSF11Q05519 484 aaKnown RBP10.4□□□□□ -0.74
SSB-209ENST00000470621 ETFBKMTQ8IXQ9 262 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 GTF3C2Q8WUA4 911 aaPredicted RBP10.4□□□□□ -0.74
SSB-209ENST00000470621 SCARF2Q96GP6 870 aaPredicted RBP10.4□□□□□ -0.74
SSB-209ENST00000470621 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 CFHR5Q9BXR6 569 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 ANKIB1Q9P2G1 1089 aa10.4□□□□□ -0.74
SSB-209ENST00000470621 IGHA1P01876 353 aa10.39□□□□□ -0.75
SSB-209ENST00000470621 SERPINB4P48594 390 aa10.39□□□□□ -0.75
SSB-209ENST00000470621 SFSWAPQ12872 951 aaKnown RBP10.39□□□□□ -0.75
SSB-209ENST00000470621 BRD7Q9NPI1 651 aa10.39□□□□□ -0.75
SSB-209ENST00000470621 C2CD2LO14523 706 aa10.38□□□□□ -0.75
SSB-209ENST00000470621 MX2P20592 715 aa10.38□□□□□ -0.75
SSB-209ENST00000470621 GRNP28799 593 aaKnown RBP10.38□□□□□ -0.75
SSB-209ENST00000470621 PDE4CQ08493 712 aa10.38□□□□□ -0.75
SSB-209ENST00000470621 ZNF211Q13398 564 aaPredicted RBP10.38□□□□□ -0.75
SSB-209ENST00000470621 HIF1AQ16665 826 aa10.38□□□□□ -0.75
SSB-209ENST00000470621 IER5Q5VY09 327 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms