RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
XRN1-208ENST00000470537 CICQ96RK0 1608 aaPredicted RBP12.18□□□□□ -0.46
XRN1-208ENST00000470537 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 PXDNLA1KZ92 1463 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 DPEP1P16444 411 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 DALRD3Q5D0E6 543 aaKnown RBP12.17□□□□□ -0.46
XRN1-208ENST00000470537 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 KLRG1Q96E93 195 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 NMRK2Q9NPI5 230 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 NCAPD2Q15021 1401 aa12.17□□□□□ -0.46
XRN1-208ENST00000470537 GYS1P13807 737 aa12.16□□□□□ -0.46
XRN1-208ENST00000470537 CABP4P57796 275 aa12.16□□□□□ -0.46
XRN1-208ENST00000470537 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
XRN1-208ENST00000470537 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
XRN1-208ENST00000470537 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
XRN1-208ENST00000470537 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
XRN1-208ENST00000470537 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
XRN1-208ENST00000470537 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
XRN1-208ENST00000470537 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
XRN1-208ENST00000470537 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
XRN1-208ENST00000470537 C1orf141Q5JVX7 400 aa12.14□□□□□ -0.47
XRN1-208ENST00000470537 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
XRN1-208ENST00000470537 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
XRN1-208ENST00000470537 MTHFSP49914 203 aa12.13□□□□□ -0.47
XRN1-208ENST00000470537 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
XRN1-208ENST00000470537 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
XRN1-208ENST00000470537 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
XRN1-208ENST00000470537 ZPR1O75312 459 aa12.12□□□□□ -0.47
XRN1-208ENST00000470537 KCNA3P22001 575 aa12.12□□□□□ -0.47
XRN1-208ENST00000470537 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
XRN1-208ENST00000470537 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
XRN1-208ENST00000470537 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
XRN1-208ENST00000470537 KDRP35968 1356 aa12.11□□□□□ -0.47
XRN1-208ENST00000470537 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
XRN1-208ENST00000470537 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
XRN1-208ENST00000470537 ZNF530Q6P9A1 599 aaPredicted RBP12.11□□□□□ -0.47
XRN1-208ENST00000470537 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
XRN1-208ENST00000470537 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
XRN1-208ENST00000470537 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
XRN1-208ENST00000470537 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
XRN1-208ENST00000470537 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
XRN1-208ENST00000470537 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
XRN1-208ENST00000470537 WDR90Q96KV7 1748 aa12.09□□□□□ -0.47
XRN1-208ENST00000470537 LMNB1P20700 586 aa12.09□□□□□ -0.47
XRN1-208ENST00000470537 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
XRN1-208ENST00000470537 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
XRN1-208ENST00000470537 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
XRN1-208ENST00000470537 PCNTO95613 3336 aa12.09□□□□□ -0.47
XRN1-208ENST00000470537 ARFGEF1Q9Y6D6 1849 aa12.09□□□□□ -0.47
XRN1-208ENST00000470537 PRELPP51888 382 aa12.08□□□□□ -0.48
XRN1-208ENST00000470537 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.48
XRN1-208ENST00000470537 GLTPD2A6NH11 291 aa12.07□□□□□ -0.48
XRN1-208ENST00000470537 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
XRN1-208ENST00000470537 TM4SF1P30408 202 aa12.07□□□□□ -0.48
XRN1-208ENST00000470537 HS6ST3Q8IZP7 471 aa12.07□□□□□ -0.48
XRN1-208ENST00000470537 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
XRN1-208ENST00000470537 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
XRN1-208ENST00000470537 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 FOXK1P85037 733 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 TTLL6Q8N841 843 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
XRN1-208ENST00000470537 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
XRN1-208ENST00000470537 H0YIN7 160 aa12.05□□□□□ -0.48
XRN1-208ENST00000470537 POLRMTO00411 1230 aaKnown RBP12.05□□□□□ -0.48
XRN1-208ENST00000470537 CHRNA5P30532 468 aa12.05□□□□□ -0.48
XRN1-208ENST00000470537 HTRA3P83110 453 aa12.05□□□□□ -0.48
XRN1-208ENST00000470537 DDR1Q08345 913 aa12.05□□□□□ -0.48
XRN1-208ENST00000470537 ADGRD1Q6QNK2 874 aa12.05□□□□□ -0.48
XRN1-208ENST00000470537 SRP68Q9UHB9 627 aaKnown RBP12.05□□□□□ -0.48
XRN1-208ENST00000470537 TNRC6CQ9HCJ0 1690 aaKnown RBP12.05□□□□□ -0.48
XRN1-208ENST00000470537 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
XRN1-208ENST00000470537 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
XRN1-208ENST00000470537 INTS5Q6P9B9 1019 aaKnown RBP12.04□□□□□ -0.48
XRN1-208ENST00000470537 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
XRN1-208ENST00000470537 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
XRN1-208ENST00000470537 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
XRN1-208ENST00000470537 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
XRN1-208ENST00000470537 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
XRN1-208ENST00000470537 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
XRN1-208ENST00000470537 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
XRN1-208ENST00000470537 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
XRN1-208ENST00000470537 SERPINB2P05120 415 aa12.02□□□□□ -0.49
XRN1-208ENST00000470537 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
XRN1-208ENST00000470537 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
XRN1-208ENST00000470537 SBF1O95248 1867 aa12.02□□□□□ -0.49
XRN1-208ENST00000470537 A0A087WZG4 1122 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 STARD3NLO95772 234 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
XRN1-208ENST00000470537 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
XRN1-208ENST00000470537 PDE6BP35913 854 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 DSG2Q14126 1118 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 NFIXQ14938 502 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 DNAJC10Q8IXB1 793 aa12.01□□□□□ -0.49
XRN1-208ENST00000470537 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
XRN1-208ENST00000470537 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms