RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-208	ENST00000470458	SOGA3	Q5TF21	947 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	TBC1D9B	Q66K14	1250 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	NBPF10	Q6P3W6	841 aa	Known RBP	14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	BICDL1	Q6ZP65	573 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	NBPF15	Q8N660	670 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	HYPK	Q9NX55	129 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	NIP7	Q9Y221	180 aa	Known RBP eCLIP	14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	BCS1L	Q9Y276	419 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	BCOR	Q6W2J9	1755 aa		14.08	□□□□□ -0.16
RFTN1-208	ENST00000470458	PXDNL	A1KZ92	1463 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	PRAMEF22	A3QJZ6	481 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	ZNF853	P0CG23	659 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	HSP90B1	P14625	803 aa	Known RBP	14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	PARP10	Q53GL7	1025 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	PPP1R42	Q7Z4L9	355 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	WDR63	Q8IWG1	891 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	TTLL6	Q8N841	843 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	CNKSR1	Q969H4	720 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	RNF123	Q5XPI4	1314 aa		14.07	□□□□□ -0.16
RFTN1-208	ENST00000470458	MYL6B	P14649	208 aa		14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	YBX3	P16989	372 aa	Known RBP eCLIP	14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	HDGFL1	Q5TGJ6	251 aa		14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	C2CD5	Q86YS7	1000 aa		14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	N4BP2	Q86UW6	1770 aa	Predicted RBP	14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	NUP98	P52948	1817 aa		14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	ARFGEF1	Q9Y6D6	1849 aa		14.06	□□□□□ -0.16
RFTN1-208	ENST00000470458	CCDC30	Q5VVM6	783 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	DUSP27	Q5VZP5	1158 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	GIGYF2	Q6Y7W6	1299 aa	Known RBP	14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	WWC1	Q8IX03	1113 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	MBIP	Q9NS73	344 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	IBTK	Q9P2D0	1353 aa	Predicted RBP	14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	CACNA1F	O60840	1977 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	ATP10D	Q9P241	1426 aa		14.05	□□□□□ -0.16
RFTN1-208	ENST00000470458	BRCA1	P38398	1863 aa	Known RBP	14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	CCER2	I3L3R5	266 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	DDX58	O95786	925 aa	Known RBP	14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	ALDH1B1	P30837	517 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	GRIPAP1	Q4V328	841 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	STYK1	Q6J9G0	422 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	PRR5L	Q6MZQ0	368 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	ARHGAP27	Q6ZUM4	889 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	MASTL	Q96GX5	879 aa		14.04	□□□□□ -0.16
RFTN1-208	ENST00000470458	STK31	Q9BXU1	1019 aa		14.03	□□□□□ -0.16
RFTN1-208	ENST00000470458	TMX4	Q9H1E5	349 aa	Predicted RBP	14.03	□□□□□ -0.16
RFTN1-208	ENST00000470458	DLEC1	Q9Y238	1755 aa		14.02	□□□□□ -0.16
RFTN1-208	ENST00000470458	KCNA3	P22001	575 aa		14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	PIP4K2A	P48426	406 aa	Predicted RBP	14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	ANKRD13D	Q6ZTN6	518 aa		14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	FAM9B	Q8IZU0	186 aa		14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	PLBD2	Q8NHP8	589 aa		14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	ZNF622	Q969S3	477 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	MYH16	Q9H6N6	1097 aa		14.02	□□□□□ -0.17
RFTN1-208	ENST00000470458	ZC3H4	Q9UPT8	1303 aa	Known RBP	14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	NPR1	P16066	1061 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	GOLGA2	Q08379	1002 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	PDIA6	Q15084	440 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	CCDC184	Q52MB2	194 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	COPS6	Q7L5N1	327 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	ZNF34	Q8IZ26	560 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	KIAA1551	Q9HCM1	1747 aa		14.01	□□□□□ -0.17
RFTN1-208	ENST00000470458	KLRG2	A4D1S0	409 aa	Predicted RBP	14	□□□□□ -0.17
RFTN1-208	ENST00000470458	CHRNA5	P30532	468 aa		14	□□□□□ -0.17
RFTN1-208	ENST00000470458	CC2D2B	Q6DHV5	1058 aa		14	□□□□□ -0.17
RFTN1-208	ENST00000470458	UTP14A	Q9BVJ6	771 aa	Known RBP	14	□□□□□ -0.17
RFTN1-208	ENST00000470458	ZBTB3	Q9H5J0	574 aa		14	□□□□□ -0.17
RFTN1-208	ENST00000470458	SRGN	P10124	158 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	TCIRG1	Q13488	830 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	HLF	Q16534	295 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	TTLL7	Q6ZT98	887 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	XAGE3	Q8WTP9	111 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	NLRP3	Q96P20	1036 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	CHPF2	Q9P2E5	772 aa		13.99	□□□□□ -0.17
RFTN1-208	ENST00000470458	RIC1	Q4ADV7	1423 aa		13.98	□□□□□ -0.17
RFTN1-208	ENST00000470458	AIMP1	Q12904	312 aa	Known RBP	13.98	□□□□□ -0.17
RFTN1-208	ENST00000470458	SLC10A5	Q5PT55	438 aa		13.98	□□□□□ -0.17
RFTN1-208	ENST00000470458	RTKN2	Q8IZC4	609 aa		13.98	□□□□□ -0.17
RFTN1-208	ENST00000470458	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.98	□□□□□ -0.17
RFTN1-208	ENST00000470458	TRIM28	Q13263	835 aa	Known RBP	13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	TWISTNB	Q3B726	338 aa	Predicted RBP	13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	LRP10	Q7Z4F1	713 aa		13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	RIC3	Q7Z5B4	369 aa		13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	NECTIN2	Q92692	538 aa		13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	RPGR	Q92834	1020 aa	Known RBP	13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	RBM17	Q96I25	401 aa	Known RBP	13.97	□□□□□ -0.17
RFTN1-208	ENST00000470458	ANKRD31	Q8N7Z5	1873 aa		13.96	□□□□□ -0.17
RFTN1-208	ENST00000470458	LMNB1	P20700	586 aa		13.96	□□□□□ -0.17
RFTN1-208	ENST00000470458	NEXN	Q0ZGT2	675 aa		13.96	□□□□□ -0.17
RFTN1-208	ENST00000470458	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.96	□□□□□ -0.17
RFTN1-208	ENST00000470458	ANKRD36C	Q5JPF3	1778 aa		13.96	□□□□□ -0.18
RFTN1-208	ENST00000470458	KDM2B	Q8NHM5	1336 aa		13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	SH3TC1	Q8TE82	1336 aa		13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	GPT	P24298	496 aa		13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	TMC4	Q7Z404	712 aa		13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	CRAMP1	Q96RY5	1269 aa		13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	TRMT112	Q9UI30	125 aa	Known RBP	13.95	□□□□□ -0.18
RFTN1-208	ENST00000470458	LTBP3	Q9NS15	1303 aa		13.94	□□□□□ -0.18
RFTN1-208	ENST00000470458	ARFGEF2	Q9Y6D5	1785 aa		13.94	□□□□□ -0.18
RFTN1-208	ENST00000470458	FAM177B	A6PVY3	158 aa		13.94	□□□□□ -0.18
RFTN1-208	ENST00000470458	ELL2	O00472	640 aa	Predicted RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms