RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
PGAP1-208ENST00000470179 TNS2Q63HR2 1409 aa20.42■□□□□ 0.86
PGAP1-208ENST00000470179 RABEP1Q15276 862 aa20.42■□□□□ 0.86
PGAP1-208ENST00000470179 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
PGAP1-208ENST00000470179 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
PGAP1-208ENST00000470179 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
PGAP1-208ENST00000470179 ONECUT3O60422 494 aaPredicted RBP20.41■□□□□ 0.86
PGAP1-208ENST00000470179 CYP2E1P05181 493 aaPredicted RBP20.41■□□□□ 0.86
PGAP1-208ENST00000470179 PHKG2P15735 406 aa20.41■□□□□ 0.86
PGAP1-208ENST00000470179 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
PGAP1-208ENST00000470179 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
PGAP1-208ENST00000470179 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 IFNL2Q8IZJ0 200 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 GJD4Q96KN9 370 aaPredicted RBP20.4■□□□□ 0.86
PGAP1-208ENST00000470179 IL25Q9H293 177 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 CYP27B1O15528 508 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 GNAI1P63096 354 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 PLCB2Q00722 1185 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 C1orf141Q5JVX7 400 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 ZNF772Q68DY9 489 aaPredicted RBP20.4■□□□□ 0.86
PGAP1-208ENST00000470179 RILPL2Q969X0 211 aa20.4■□□□□ 0.86
PGAP1-208ENST00000470179 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
PGAP1-208ENST00000470179 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
PGAP1-208ENST00000470179 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 TMX3Q96JJ7 454 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 MRC1P22897 1456 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 ZNF853P0CG23 659 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 ZNF445P59923 1031 aa20.38■□□□□ 0.85
PGAP1-208ENST00000470179 INTS3Q68E01 1043 aaKnown RBP20.38■□□□□ 0.85
PGAP1-208ENST00000470179 SIPA1L3O60292 1781 aaPredicted RBP20.37■□□□□ 0.85
PGAP1-208ENST00000470179 TPM2P07951 284 aa20.37■□□□□ 0.85
PGAP1-208ENST00000470179 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
PGAP1-208ENST00000470179 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
PGAP1-208ENST00000470179 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 EXOC5O00471 708 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 PTMAP06454 111 aaKnown RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 NUCB2P80303 420 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 QTRT2Q9H974 415 aaKnown RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 RNMTO43148 476 aaKnown RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 DCAF5Q96JK2 942 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
PGAP1-208ENST00000470179 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
PGAP1-208ENST00000470179 ST18O60284 1047 aa20.35■□□□□ 0.85
PGAP1-208ENST00000470179 CPA1P15085 419 aa20.34■□□□□ 0.85
PGAP1-208ENST00000470179 DNTTIP2Q5QJE6 756 aaKnown RBP20.34■□□□□ 0.85
PGAP1-208ENST00000470179 ANKRD44Q8N8A2 993 aa20.34■□□□□ 0.85
PGAP1-208ENST00000470179 TTC12Q9H892 705 aaPredicted RBP20.34■□□□□ 0.85
PGAP1-208ENST00000470179 IL1RAPL2Q9NP60 686 aa20.33■□□□□ 0.85
PGAP1-208ENST00000470179 DDB1Q16531 1140 aa20.33■□□□□ 0.84
PGAP1-208ENST00000470179 CHL1O00533 1208 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 FAM98CQ17RN3 349 aaKnown RBP20.32■□□□□ 0.84
PGAP1-208ENST00000470179 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.32■□□□□ 0.84
PGAP1-208ENST00000470179 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
PGAP1-208ENST00000470179 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 CLEC17AQ6ZS10 378 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 PDLIM2Q96JY6 352 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
PGAP1-208ENST00000470179 BCL9O00512 1426 aa20.31■□□□□ 0.84
PGAP1-208ENST00000470179 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
PGAP1-208ENST00000470179 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
PGAP1-208ENST00000470179 ZHX1Q9UKY1 873 aaPredicted RBP20.31■□□□□ 0.84
PGAP1-208ENST00000470179 ATP10DQ9P241 1426 aa20.31■□□□□ 0.84
PGAP1-208ENST00000470179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
PGAP1-208ENST00000470179 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 PNMA6EA0A0J9YXQ4 647 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 ERVV-2B6SEH9 535 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 PDE1AP54750 535 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 KDM3BQ7LBC6 1761 aa20.3■□□□□ 0.84
PGAP1-208ENST00000470179 ERC2O15083 957 aa20.29■□□□□ 0.84
PGAP1-208ENST00000470179 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
PGAP1-208ENST00000470179 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
PGAP1-208ENST00000470179 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
PGAP1-208ENST00000470179 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
PGAP1-208ENST00000470179 SLC52A2Q9HAB3 445 aa20.28■□□□□ 0.84
PGAP1-208ENST00000470179 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
PGAP1-208ENST00000470179 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
PGAP1-208ENST00000470179 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
PGAP1-208ENST00000470179 TCHHQ07283 1943 aa20.27■□□□□ 0.84
PGAP1-208ENST00000470179 USP48Q86UV5 1035 aa20.26■□□□□ 0.83
PGAP1-208ENST00000470179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.26■□□□□ 0.83
PGAP1-208ENST00000470179 IGSF3O75054 1194 aa20.26■□□□□ 0.83
PGAP1-208ENST00000470179 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
PGAP1-208ENST00000470179 TEFQ10587 303 aa20.26■□□□□ 0.83
PGAP1-208ENST00000470179 CASC1Q6TDU7 716 aa20.26■□□□□ 0.83
PGAP1-208ENST00000470179 CNPY2Q9Y2B0 182 aa20.26■□□□□ 0.83
PGAP1-208ENST00000470179 PAPPAQ13219 1627 aa20.25■□□□□ 0.83
PGAP1-208ENST00000470179 RGS12O14924 1447 aa20.25■□□□□ 0.83
PGAP1-208ENST00000470179 ITGB4P16144 1822 aa20.25■□□□□ 0.83
PGAP1-208ENST00000470179 REC8O95072 547 aa20.24■□□□□ 0.83
PGAP1-208ENST00000470179 SEPT12Q8IYM1 358 aa20.24■□□□□ 0.83
PGAP1-208ENST00000470179 ZNF500O60304 480 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms