RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 PDIA6Q15084 440 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 NLGN2Q8NFZ4 835 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 MYH16Q9H6N6 1097 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 CHPF2Q9P2E5 772 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 SERPINB2P05120 415 aa24.96■■□□□ 1.59
PCGF3-208ENST00000470161 TTLL7Q6ZT98 887 aa24.96■■□□□ 1.59
PCGF3-208ENST00000470161 SUPT16HQ9Y5B9 1047 aaKnown RBP24.96■■□□□ 1.59
PCGF3-208ENST00000470161 ERVV-1B6SEH8 477 aa24.95■■□□□ 1.58
PCGF3-208ENST00000470161 AIMP1Q12904 312 aaKnown RBP24.95■■□□□ 1.58
PCGF3-208ENST00000470161 PROSER3Q2NL68 480 aa24.95■■□□□ 1.58
PCGF3-208ENST00000470161 MAP3K15Q6ZN16 1313 aa24.95■■□□□ 1.58
PCGF3-208ENST00000470161 RGL2O15211 777 aa24.94■■□□□ 1.58
PCGF3-208ENST00000470161 ZNF521Q96K83 1311 aa24.94■■□□□ 1.58
PCGF3-208ENST00000470161 FANCIQ9NVI1 1328 aa24.94■■□□□ 1.58
PCGF3-208ENST00000470161 CCDC30Q5VVM6 783 aa24.94■■□□□ 1.58
PCGF3-208ENST00000470161 ZBTB3Q9H5J0 574 aa24.94■■□□□ 1.58
PCGF3-208ENST00000470161 SCN7AQ01118 1682 aa24.93■■□□□ 1.58
PCGF3-208ENST00000470161 CARMIL3Q8ND23 1372 aa24.93■■□□□ 1.58
PCGF3-208ENST00000470161 TWISTNBQ3B726 338 aaPredicted RBP24.93■■□□□ 1.58
PCGF3-208ENST00000470161 COPS6Q7L5N1 327 aa24.93■■□□□ 1.58
PCGF3-208ENST00000470161 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
PCGF3-208ENST00000470161 HYPKQ9NX55 129 aa24.93■■□□□ 1.58
PCGF3-208ENST00000470161 NEFLP07196 543 aa24.92■■□□□ 1.58
PCGF3-208ENST00000470161 TSPYL6Q8N831 410 aa24.92■■□□□ 1.58
PCGF3-208ENST00000470161 NIP7Q9Y221 180 aaKnown RBP eCLIP24.92■■□□□ 1.58
PCGF3-208ENST00000470161 TGFB2P61812 414 aa24.91■■□□□ 1.58
PCGF3-208ENST00000470161 HLFQ16534 295 aa24.91■■□□□ 1.58
PCGF3-208ENST00000470161 XAGE3Q8WTP9 111 aa24.91■■□□□ 1.58
PCGF3-208ENST00000470161 GPR162Q16538 588 aa24.91■■□□□ 1.58
PCGF3-208ENST00000470161 LRP10Q7Z4F1 713 aa24.9■■□□□ 1.58
PCGF3-208ENST00000470161 STK31Q9BXU1 1019 aa24.9■■□□□ 1.58
PCGF3-208ENST00000470161 SPINK5Q9NQ38 1064 aaPredicted RBP24.9■■□□□ 1.58
PCGF3-208ENST00000470161 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
PCGF3-208ENST00000470161 NBPF5PQ86XG9 351 aaPredicted RBP24.89■■□□□ 1.58
PCGF3-208ENST00000470161 BCORQ6W2J9 1755 aa24.88■■□□□ 1.57
PCGF3-208ENST00000470161 EXOSC9Q06265 439 aaKnown RBP24.88■■□□□ 1.57
PCGF3-208ENST00000470161 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
PCGF3-208ENST00000470161 GIGYF2Q6Y7W6 1299 aaKnown RBP24.88■■□□□ 1.57
PCGF3-208ENST00000470161 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
PCGF3-208ENST00000470161 E9PSI1 815 aa24.87■■□□□ 1.57
PCGF3-208ENST00000470161 GTF2E1P29083 439 aaPredicted RBP24.87■■□□□ 1.57
PCGF3-208ENST00000470161 ST5P78524 1137 aa24.87■■□□□ 1.57
PCGF3-208ENST00000470161 CDCA7LQ96GN5 454 aa24.87■■□□□ 1.57
PCGF3-208ENST00000470161 GOLGB1Q14789 3259 aaKnown RBP24.86■■□□□ 1.57
PCGF3-208ENST00000470161 A0A0G2JLW4 131 aa24.86■■□□□ 1.57
PCGF3-208ENST00000470161 TPTE2Q6XPS3 522 aa24.86■■□□□ 1.57
PCGF3-208ENST00000470161 ANKRD13DQ6ZTN6 518 aa24.86■■□□□ 1.57
PCGF3-208ENST00000470161 HSP90AB3PQ58FF7 597 aa24.85■■□□□ 1.57
PCGF3-208ENST00000470161 GPTP24298 496 aa24.85■■□□□ 1.57
PCGF3-208ENST00000470161 PRR5LQ6MZQ0 368 aa24.85■■□□□ 1.57
PCGF3-208ENST00000470161 WWC3Q9ULE0 1092 aa24.85■■□□□ 1.57
PCGF3-208ENST00000470161 TCERG1O14776 1098 aaKnown RBP24.83■■□□□ 1.57
PCGF3-208ENST00000470161 DPEP1P16444 411 aa24.83■■□□□ 1.57
PCGF3-208ENST00000470161 PLBD2Q8NHP8 589 aa24.83■■□□□ 1.57
PCGF3-208ENST00000470161 NYXQ9GZU5 481 aa24.83■■□□□ 1.57
PCGF3-208ENST00000470161 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
PCGF3-208ENST00000470161 BRIP1Q9BX63 1249 aa24.82■■□□□ 1.56
PCGF3-208ENST00000470161 PHAXQ9H814 394 aaKnown RBP24.82■■□□□ 1.56
PCGF3-208ENST00000470161 ATP10DQ9P241 1426 aa24.82■■□□□ 1.56
PCGF3-208ENST00000470161 VAMP4O75379 141 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 DDX58O95786 925 aaKnown RBP24.81■■□□□ 1.56
PCGF3-208ENST00000470161 PDE6BP35913 854 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 RIC3Q7Z5B4 369 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 AFDNP55196 1824 aaKnown RBP24.81■■□□□ 1.56
PCGF3-208ENST00000470161 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 SLC4A2P04920 1241 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 ZNF34Q8IZ26 560 aa24.81■■□□□ 1.56
PCGF3-208ENST00000470161 H0YIN7 160 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 CHRNA5P30532 468 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 SLFN5Q08AF3 891 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 PARP10Q53GL7 1025 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 PPP1R42Q7Z4L9 355 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 PIM2Q9P1W9 311 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 KIF13BQ9NQT8 1826 aa24.8■■□□□ 1.56
PCGF3-208ENST00000470161 NUP98P52948 1817 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 GRIN3BO60391 1043 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 IRX6P78412 446 aaPredicted RBP24.79■■□□□ 1.56
PCGF3-208ENST00000470161 TCIRG1Q13488 830 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 PDZRN3Q9UPQ7 1066 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 UTRNP46939 3433 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 NRXN2Q9P2S2 1712 aa24.79■■□□□ 1.56
PCGF3-208ENST00000470161 BCS1LQ9Y276 419 aa24.78■■□□□ 1.56
PCGF3-208ENST00000470161 C2CD5Q86YS7 1000 aa24.78■■□□□ 1.56
PCGF3-208ENST00000470161 UBN2Q6ZU65 1347 aa24.76■■□□□ 1.55
PCGF3-208ENST00000470161 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
PCGF3-208ENST00000470161 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.55
PCGF3-208ENST00000470161 SUSD4Q5VX71 490 aa24.76■■□□□ 1.55
PCGF3-208ENST00000470161 N4BP2Q86UW6 1770 aaPredicted RBP24.76■■□□□ 1.55
PCGF3-208ENST00000470161 KCNA3P22001 575 aa24.75■■□□□ 1.55
PCGF3-208ENST00000470161 NUTM1Q86Y26 1132 aa24.75■■□□□ 1.55
PCGF3-208ENST00000470161 UTP14AQ9BVJ6 771 aaKnown RBP24.75■■□□□ 1.55
PCGF3-208ENST00000470161 DALRD3Q5D0E6 543 aaKnown RBP24.75■■□□□ 1.55
PCGF3-208ENST00000470161 ZNF622Q969S3 477 aaKnown RBP eCLIP24.74■■□□□ 1.552e-6■■■□□ 15.3
PCGF3-208ENST00000470161 ATP5J2-PTCD1G3V325 749 aa24.73■■□□□ 1.55
PCGF3-208ENST00000470161 NLRP10Q86W26 655 aa24.73■■□□□ 1.55
PCGF3-208ENST00000470161 TRMT2AQ8IZ69 625 aaKnown RBP24.73■■□□□ 1.55
PCGF3-208ENST00000470161 IBTKQ9P2D0 1353 aaPredicted RBP24.73■■□□□ 1.55
PCGF3-208ENST00000470161 ERFEQ4G0M1 354 aa24.72■■□□□ 1.55
PCGF3-208ENST00000470161 TRMT112Q9UI30 125 aaKnown RBP24.72■■□□□ 1.55
PCGF3-208ENST00000470161 NTSR2O95665 410 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms