RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 CHMP5Q9NZZ3 219 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 KIF3AQ9Y496 699 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 RRP9O43818 475 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 PLBD2Q8NHP8 589 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 MCM2P49736 904 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 MRE11P49959 708 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 NKX1-1Q15270 411 aaPredicted RBP8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 HSP90AB3PQ58FF7 597 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 MYD88Q99836 296 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 POLA2Q14181 598 aa8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 CIZ1Q9ULV3 898 aaPredicted RBP8.43□□□□□ -1.06
GAPVD1-215ENST00000470056 SMARCA5O60264 1052 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 CALRP27797 417 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 BTG4Q9NY30 223 aa8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 DHX8Q14562 1220 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 DRC7Q8IY82 874 aa8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 SDSP20132 328 aa8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 ANXA1P04083 346 aa8.42□□□□□ -1.06
GAPVD1-215ENST00000470056 ADCY9O60503 1353 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 SEC24BO95487 1268 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 THRAP3Q9Y2W1 955 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 PNMA6EA0A0J9YXQ4 647 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 CWC25Q9NXE8 425 aaPredicted RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 CCDC66A2RUB6 948 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 NBPF7P0C2Y1 421 aaPredicted RBP8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 ECHDC1Q9NTX5 307 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 MRC1P22897 1456 aa8.41□□□□□ -1.06
GAPVD1-215ENST00000470056 GCKRQ14397 625 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 CHMP3Q9Y3E7 222 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 ANAPC15P60006 121 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 TEX35Q5T0J7 233 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 IL1RAPL2Q9NP60 686 aa8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-215ENST00000470056 A0A0G2JS52 829 aa8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 NEURL1BA8MQ27 555 aa8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 GSPT1P15170 499 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 PLCB2Q00722 1185 aa8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 AACSQ86V21 672 aa8.4□□□□□ -1.07
GAPVD1-215ENST00000470056 A0A087WZG4 1122 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 UTYO14607 1347 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 PROSER3Q2NL68 480 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 KCNJ4P48050 445 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 TAF7LQ5H9L4 462 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 EVI5LQ96CN4 794 aa8.39□□□□□ -1.07
GAPVD1-215ENST00000470056 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 PKNOX2Q96KN3 472 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 FGD1P98174 961 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 SYTL4Q96C24 671 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 ZKSCAN1P17029 563 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 NFKBIBQ15653 356 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 PARP4Q9UKK3 1724 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 RAD50Q92878 1312 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 DDB1Q16531 1140 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 UBE3BQ7Z3V4 1068 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 ESYT1Q9BSJ8 1104 aa8.38□□□□□ -1.07
GAPVD1-215ENST00000470056 NUCB2P80303 420 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 SUCLG2Q96I99 432 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 OTUD7AQ8TE49 926 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 PDIA6Q15084 440 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 TICAM2Q86XR7 235 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 COL15A1P39059 1388 aa8.37□□□□□ -1.07
GAPVD1-215ENST00000470056 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 STRCP1A6NGW2 1772 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 GORABQ5T7V8 394 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 FBXO3Q9UK99 471 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 CACNA1FO60840 1977 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 PRAMEF22A3QJZ6 481 aa8.36□□□□□ -1.07
GAPVD1-215ENST00000470056 CHMLP26374 656 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms