RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
COMMD2-202ENST00000469896 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
COMMD2-202ENST00000469896 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
COMMD2-202ENST00000469896 FYB1O15117 783 aa15.75■□□□□ 0.11
COMMD2-202ENST00000469896 PDE6BP35913 854 aa15.75■□□□□ 0.11
COMMD2-202ENST00000469896 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
COMMD2-202ENST00000469896 MIER1Q8N108 512 aa15.75■□□□□ 0.11
COMMD2-202ENST00000469896 SOX10P56693 466 aa15.74■□□□□ 0.11
COMMD2-202ENST00000469896 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
COMMD2-202ENST00000469896 CARD11Q9BXL7 1154 aa15.73■□□□□ 0.11
COMMD2-202ENST00000469896 NARFQ9UHQ1 456 aa15.73■□□□□ 0.11
COMMD2-202ENST00000469896 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
COMMD2-202ENST00000469896 BRPF1P55201 1214 aaPredicted RBP15.71■□□□□ 0.11
COMMD2-202ENST00000469896 CNKSR1Q969H4 720 aa15.71■□□□□ 0.11
COMMD2-202ENST00000469896 EYA1Q99502 592 aa15.71■□□□□ 0.11
COMMD2-202ENST00000469896 BRIP1Q9BX63 1249 aa15.71■□□□□ 0.11
COMMD2-202ENST00000469896 CARMIL3Q8ND23 1372 aa15.71■□□□□ 0.11
COMMD2-202ENST00000469896 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.1
COMMD2-202ENST00000469896 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
COMMD2-202ENST00000469896 FER1L6Q2WGJ9 1857 aa15.7■□□□□ 0.1
COMMD2-202ENST00000469896 NBPF15Q8N660 670 aa15.7■□□□□ 0.1
COMMD2-202ENST00000469896 EMILIN1Q9Y6C2 1016 aa15.7■□□□□ 0.1
COMMD2-202ENST00000469896 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
COMMD2-202ENST00000469896 RNF123Q5XPI4 1314 aa15.69■□□□□ 0.1
COMMD2-202ENST00000469896 AOC2O75106 756 aa15.69■□□□□ 0.1
COMMD2-202ENST00000469896 DCBLD2Q96PD2 775 aa15.69■□□□□ 0.1
COMMD2-202ENST00000469896 TLL2Q9Y6L7 1015 aa15.69■□□□□ 0.1
COMMD2-202ENST00000469896 ADAMTSL1Q8N6G6 1762 aa15.69■□□□□ 0.1
COMMD2-202ENST00000469896 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
COMMD2-202ENST00000469896 AFDNP55196 1824 aaKnown RBP15.68■□□□□ 0.1
COMMD2-202ENST00000469896 COL15A1P39059 1388 aa15.68■□□□□ 0.1
COMMD2-202ENST00000469896 SLC24A1O60721 1099 aa15.68■□□□□ 0.1
COMMD2-202ENST00000469896 PRPF40BQ6NWY9 871 aaKnown RBP15.68■□□□□ 0.1
COMMD2-202ENST00000469896 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
COMMD2-202ENST00000469896 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
COMMD2-202ENST00000469896 ST20-MTHFSA0A0A6YYL1 179 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 NPHP1O15259 732 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 LMOD1P29536 600 aaPredicted RBP15.66■□□□□ 0.1
COMMD2-202ENST00000469896 MTHFSP49914 203 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
COMMD2-202ENST00000469896 CCDC93Q567U6 631 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 STYK1Q6J9G0 422 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 GPC2Q8N158 579 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
COMMD2-202ENST00000469896 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
COMMD2-202ENST00000469896 LHX8Q68G74 356 aa15.65■□□□□ 0.1
COMMD2-202ENST00000469896 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
COMMD2-202ENST00000469896 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
COMMD2-202ENST00000469896 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
COMMD2-202ENST00000469896 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
COMMD2-202ENST00000469896 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
COMMD2-202ENST00000469896 HHIPL1Q96JK4 782 aa15.64■□□□□ 0.09
COMMD2-202ENST00000469896 FKBP4Q02790 459 aaKnown RBP eCLIP15.63■□□□□ 0.09
COMMD2-202ENST00000469896 AMOTQ4VCS5 1084 aa15.63■□□□□ 0.09
COMMD2-202ENST00000469896 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
COMMD2-202ENST00000469896 CST9Q5W186 159 aa15.63■□□□□ 0.09
COMMD2-202ENST00000469896 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
COMMD2-202ENST00000469896 TJP1Q07157 1748 aa15.63■□□□□ 0.09
COMMD2-202ENST00000469896 CIAPIN1Q6FI81 312 aa15.62■□□□□ 0.09
COMMD2-202ENST00000469896 PRR5LQ6MZQ0 368 aa15.62■□□□□ 0.09
COMMD2-202ENST00000469896 SAPCD2Q86UD0 394 aa15.62■□□□□ 0.09
COMMD2-202ENST00000469896 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
COMMD2-202ENST00000469896 ZNF277Q9NRM2 450 aaPredicted RBP15.62■□□□□ 0.09
COMMD2-202ENST00000469896 A0A087WZG4 1122 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 FZD9O00144 591 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 SRGNP10124 158 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
COMMD2-202ENST00000469896 ST5P78524 1137 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 NOGQ13253 232 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 HABP4Q5JVS0 413 aaKnown RBP15.61■□□□□ 0.09
COMMD2-202ENST00000469896 RASEFQ8IZ41 740 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 CNBD1Q8NA66 436 aa15.61■□□□□ 0.09
COMMD2-202ENST00000469896 TRAF5O00463 557 aa15.6■□□□□ 0.09
COMMD2-202ENST00000469896 FMR1Q06787 632 aaKnown RBP eCLIP15.6■□□□□ 0.09
COMMD2-202ENST00000469896 JDP2Q8WYK2 163 aa15.6■□□□□ 0.09
COMMD2-202ENST00000469896 ZBTB1Q9Y2K1 713 aa15.6■□□□□ 0.09
COMMD2-202ENST00000469896 USP50Q70EL3 339 aaPredicted RBP15.59■□□□□ 0.09
COMMD2-202ENST00000469896 CCDC24Q8N4L8 307 aa15.59■□□□□ 0.09
COMMD2-202ENST00000469896 ANKRD26Q9UPS8 1709 aa15.58■□□□□ 0.08
COMMD2-202ENST00000469896 CELF2O95319 508 aaKnown RBP15.58■□□□□ 0.08
COMMD2-202ENST00000469896 IARSP41252 1262 aaKnown RBP15.58■□□□□ 0.08
COMMD2-202ENST00000469896 EIF6P56537 245 aaKnown RBP15.58■□□□□ 0.08
COMMD2-202ENST00000469896 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
COMMD2-202ENST00000469896 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
COMMD2-202ENST00000469896 SAGE1Q9NXZ1 904 aa15.58■□□□□ 0.08
COMMD2-202ENST00000469896 GJA3Q9Y6H8 435 aa15.58■□□□□ 0.08
COMMD2-202ENST00000469896 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
COMMD2-202ENST00000469896 C7orf43Q8WVR3 580 aa15.57■□□□□ 0.08
COMMD2-202ENST00000469896 TESK2Q96S53 571 aa15.57■□□□□ 0.08
COMMD2-202ENST00000469896 SLX4Q8IY92 1834 aa15.57■□□□□ 0.08
COMMD2-202ENST00000469896 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
COMMD2-202ENST00000469896 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
COMMD2-202ENST00000469896 EIF4A2Q14240 407 aaKnown RBP15.56■□□□□ 0.08
COMMD2-202ENST00000469896 AKAP4Q5JQC9 854 aa15.56■□□□□ 0.08
COMMD2-202ENST00000469896 SETDB2Q96T68 719 aa15.56■□□□□ 0.08
COMMD2-202ENST00000469896 KIF20BQ96Q89 1820 aa15.56■□□□□ 0.08
COMMD2-202ENST00000469896 ANKRD31Q8N7Z5 1873 aa15.56■□□□□ 0.08
COMMD2-202ENST00000469896 CTU1Q7Z7A3 348 aaKnown RBP15.55■□□□□ 0.08
COMMD2-202ENST00000469896 STARD3NLO95772 234 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms