RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TTC5Q8N0Z6 440 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-203ENST00000469739 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
TOP3A-203ENST00000469739 BICC1Q9H694 974 aaKnown RBP11.47□□□□□ -0.57
TOP3A-203ENST00000469739 PRDM11Q9NQV5 511 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 CYP27B1O15528 508 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 AACSQ86V21 672 aa11.47□□□□□ -0.57
TOP3A-203ENST00000469739 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
TOP3A-203ENST00000469739 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-203ENST00000469739 GOLGA6L3A6NEY3 463 aa11.46□□□□□ -0.57
TOP3A-203ENST00000469739 KDM3BQ7LBC6 1761 aa11.46□□□□□ -0.57
TOP3A-203ENST00000469739 DCCP43146 1447 aa11.46□□□□□ -0.58
TOP3A-203ENST00000469739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.46□□□□□ -0.58
TOP3A-203ENST00000469739 GBP4Q96PP9 640 aa11.46□□□□□ -0.58
TOP3A-203ENST00000469739 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.58
TOP3A-203ENST00000469739 NCAPD2Q15021 1401 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
TOP3A-203ENST00000469739 RAB3GAP1Q15042 981 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 N4BP2Q86UW6 1770 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-203ENST00000469739 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 CHGBP05060 677 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
TOP3A-203ENST00000469739 PHKG2P15735 406 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 CABP4P57796 275 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 CLASRPQ8N2M8 674 aaKnown RBP11.45□□□□□ -0.58
TOP3A-203ENST00000469739 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
TOP3A-203ENST00000469739 DDX49Q9Y6V7 483 aaKnown RBP11.45□□□□□ -0.58
TOP3A-203ENST00000469739 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 SLC52A2Q9HAB3 445 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 GRM8O00222 908 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 DDIT3P35638 169 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 TMX3Q96JJ7 454 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 TCEANC2Q96MN5 208 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 SALL3Q9BXA9 1300 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 OSBPL3Q9H4L5 887 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
TOP3A-203ENST00000469739 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
TOP3A-203ENST00000469739 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
TOP3A-203ENST00000469739 PDIA6Q15084 440 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 DDX11L8A8MPP1 907 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
TOP3A-203ENST00000469739 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 ZBTB3Q9H5J0 574 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
TOP3A-203ENST00000469739 NCOA3Q9Y6Q9 1424 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 STRCQ7RTU9 1775 aa11.43□□□□□ -0.58
TOP3A-203ENST00000469739 A1BGP04217 495 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 BRD2P25440 801 aaKnown RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 KCNJ4P48050 445 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 DIAPH3Q9NSV4 1193 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 DDX58O95786 925 aaKnown RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 MCCP23508 829 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 NEXNQ0ZGT2 675 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 POLA2Q14181 598 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 BABAM1Q9NWV8 329 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 HYPKQ9NX55 129 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 EVA1CP58658 441 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-203ENST00000469739 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
TOP3A-203ENST00000469739 COL18A1P39060 1754 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 CAVIN1Q6NZI2 390 aaKnown RBP11.41□□□□□ -0.58
TOP3A-203ENST00000469739 PPP4R3CPQ6ZMV5 832 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 MEGF6O75095 1541 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-203ENST00000469739 SASH1O94885 1247 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 CNTROBQ8N137 903 aa11.41□□□□□ -0.58
TOP3A-203ENST00000469739 PTH1RQ03431 593 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
TOP3A-203ENST00000469739 BRINP3Q76B58 766 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 SYTL4Q96C24 671 aaPredicted RBP11.4□□□□□ -0.58
TOP3A-203ENST00000469739 A0A087WZG4 1122 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 TTLL7Q6ZT98 887 aa11.4□□□□□ -0.58
TOP3A-203ENST00000469739 DNAJC2Q99543 621 aaKnown RBP11.4□□□□□ -0.59
TOP3A-203ENST00000469739 STAP2Q9UGK3 403 aa11.4□□□□□ -0.59
TOP3A-203ENST00000469739 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.59
TOP3A-203ENST00000469739 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms