RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 ANAPC15P60006 121 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 PUS7Q96PZ0 661 aaKnown RBP11.88□□□□□ -0.51
NUP50-214ENST00000469163 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
NUP50-214ENST00000469163 EXOC5O00471 708 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 MAP4K4O95819 1239 aaPredicted RBP11.88□□□□□ -0.51
NUP50-214ENST00000469163 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
NUP50-214ENST00000469163 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
NUP50-214ENST00000469163 KIAA1210Q9ULL0 1709 aa11.88□□□□□ -0.51
NUP50-214ENST00000469163 IL1RAPL2Q9NP60 686 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 LAMC1P11047 1609 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 VAMP4O75379 141 aa11.87□□□□□ -0.51
NUP50-214ENST00000469163 SSR1P43307 286 aaKnown RBP11.87□□□□□ -0.51
NUP50-214ENST00000469163 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
NUP50-214ENST00000469163 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
NUP50-214ENST00000469163 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
NUP50-214ENST00000469163 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
NUP50-214ENST00000469163 BIRC2Q13490 618 aa11.86□□□□□ -0.51
NUP50-214ENST00000469163 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
NUP50-214ENST00000469163 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
NUP50-214ENST00000469163 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
NUP50-214ENST00000469163 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
NUP50-214ENST00000469163 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
NUP50-214ENST00000469163 RWDD1Q9H446 243 aaPredicted RBP11.86□□□□□ -0.51
NUP50-214ENST00000469163 CD163L1Q9NR16 1453 aa11.86□□□□□ -0.51
NUP50-214ENST00000469163 A1BGP04217 495 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 NOL8Q76FK4 1167 aaKnown RBP11.85□□□□□ -0.51
NUP50-214ENST00000469163 MEIS3Q99687 375 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 MPHOSPH10O00566 681 aaKnown RBP11.85□□□□□ -0.51
NUP50-214ENST00000469163 GUCY2CP25092 1073 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 CCDC30Q5VVM6 783 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 IFNL2Q8IZJ0 200 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
NUP50-214ENST00000469163 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 SUFUQ9UMX1 484 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
NUP50-214ENST00000469163 KDM2BQ8NHM5 1336 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 IL2RBP14784 551 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 TBC1D2BQ9UPU7 963 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 USP16Q9Y5T5 823 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 ERBB3P21860 1342 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 FLIIQ13045 1269 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 LRCH2Q5VUJ6 765 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 PIK3R5Q8WYR1 880 aa11.84□□□□□ -0.51
NUP50-214ENST00000469163 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
NUP50-214ENST00000469163 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
NUP50-214ENST00000469163 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.51
NUP50-214ENST00000469163 DDB1Q16531 1140 aa11.83□□□□□ -0.51
NUP50-214ENST00000469163 KRT222Q8N1A0 295 aa11.83□□□□□ -0.51
NUP50-214ENST00000469163 C17orf53Q8N3J3 647 aaPredicted RBP11.83□□□□□ -0.51
NUP50-214ENST00000469163 RILPL2Q969X0 211 aa11.83□□□□□ -0.51
NUP50-214ENST00000469163 DEF6Q9H4E7 631 aa11.83□□□□□ -0.51
NUP50-214ENST00000469163 DONSONQ9NYP3 566 aa11.83□□□□□ -0.51
NUP50-214ENST00000469163 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 PPP2R5AQ15172 486 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
NUP50-214ENST00000469163 E2F4Q16254 413 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 GOLGA6L1Q8N7Z2 621 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 BRMS1Q9HCU9 246 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 DDX19BQ9UMR2 479 aa11.83□□□□□ -0.52
NUP50-214ENST00000469163 HSPA1LP34931 641 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
NUP50-214ENST00000469163 CAVIN1Q6NZI2 390 aaKnown RBP11.82□□□□□ -0.52
NUP50-214ENST00000469163 MYD88Q99836 296 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 RAI14Q9P0K7 980 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 ASAP1Q9ULH1 1129 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
NUP50-214ENST00000469163 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 SETBP1Q9Y6X0 1596 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 TRIM66O15016 1216 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
NUP50-214ENST00000469163 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 RNF214Q8ND24 703 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 RBSNQ9H1K0 784 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 CXorf56Q9H5V9 222 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 DIAPH3Q9NSV4 1193 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 PPP1R1BQ9UD71 204 aaPredicted RBP11.82□□□□□ -0.52
NUP50-214ENST00000469163 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 JRKLQ9Y4A0 524 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 NPC1L1Q9UHC9 1359 aa11.82□□□□□ -0.52
NUP50-214ENST00000469163 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 CASQ1P31415 396 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 RIOK3O14730 519 aaKnown RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 CYP27B1O15528 508 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 C16orf71Q8IYS4 520 aaPredicted RBP11.81□□□□□ -0.52
NUP50-214ENST00000469163 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
NUP50-214ENST00000469163 ARHGAP23Q9P227 1491 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms