RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 RARSP54136 660 aaKnown RBP6.99□□□□□ -1.29
SND1-207ENST00000468621 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
SND1-207ENST00000468621 INTS5Q6P9B9 1019 aaKnown RBP6.99□□□□□ -1.29
SND1-207ENST00000468621 RTF1Q92541 710 aaKnown RBP6.99□□□□□ -1.29
SND1-207ENST00000468621 ZNF496Q96IT1 587 aaPredicted RBP6.99□□□□□ -1.29
SND1-207ENST00000468621 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
SND1-207ENST00000468621 RTCBQ9Y3I0 505 aaKnown RBP6.99□□□□□ -1.29
SND1-207ENST00000468621 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 ADRA2BP18089 450 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 POLD1P28340 1107 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 CCDC27Q2M243 656 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 TTC5Q8N0Z6 440 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
SND1-207ENST00000468621 THUMPD2Q9BTF0 503 aaKnown RBP6.98□□□□□ -1.29
SND1-207ENST00000468621 MYH16Q9H6N6 1097 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 CCDC87Q9NVE4 849 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 PDZRN3Q9UPQ7 1066 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 ZBTB1Q9Y2K1 713 aa6.98□□□□□ -1.29
SND1-207ENST00000468621 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
SND1-207ENST00000468621 SOS1Q07889 1333 aaPredicted RBP6.98□□□□□ -1.29
SND1-207ENST00000468621 ARFGEF2Q9Y6D5 1785 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 COL15A1P39059 1388 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 PRAMEF22A3QJZ6 481 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 GYS1P13807 737 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 TMPOP42166 694 aaKnown RBP6.97□□□□□ -1.29
SND1-207ENST00000468621 NEUROD2Q15784 382 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 TRAPPC3LQ5T215 181 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 L1TD1Q5T7N2 865 aaKnown RBP6.97□□□□□ -1.29
SND1-207ENST00000468621 FMNL2Q96PY5 1086 aa6.97□□□□□ -1.29
SND1-207ENST00000468621 PNNQ9H307 717 aaKnown RBP6.97□□□□□ -1.29
SND1-207ENST00000468621 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
SND1-207ENST00000468621 USP42Q9H9J4 1324 aaKnown RBP6.97□□□□□ -1.29
SND1-207ENST00000468621 DICER1Q9UPY3 1922 aaKnown RBP6.96□□□□□ -1.3
SND1-207ENST00000468621 LAMB2P55268 1798 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 CT47B1P0C2W7 299 aaPredicted RBP6.96□□□□□ -1.3
SND1-207ENST00000468621 RFC4P35249 363 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 RIPK4P57078 832 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 TAF7Q15545 349 aaPredicted RBP6.96□□□□□ -1.3
SND1-207ENST00000468621 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 NLGN2Q8NFZ4 835 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 SRP68Q9UHB9 627 aaKnown RBP6.96□□□□□ -1.3
SND1-207ENST00000468621 USP16Q9Y5T5 823 aa6.96□□□□□ -1.3
SND1-207ENST00000468621 C10orf71Q711Q0 1435 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 SEC24BO95487 1268 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 STARD3NLO95772 234 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 A1BGP04217 495 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 MMP10P09238 476 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 EIF5P55010 431 aaKnown RBP6.95□□□□□ -1.3
SND1-207ENST00000468621 MVPQ14764 893 aaKnown RBP6.95□□□□□ -1.3
SND1-207ENST00000468621 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 TRIM35Q9UPQ4 493 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
SND1-207ENST00000468621 TAF1P21675 1872 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 FER1L6Q2WGJ9 1857 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 SNRPA1P09661 255 aaKnown RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 PIP4K2AP48426 406 aaPredicted RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 EIF4A1P60842 406 aaKnown RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 DDR1Q08345 913 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 USPL1Q5W0Q7 1092 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 FTSJ3Q8IY81 847 aaKnown RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
SND1-207ENST00000468621 BCL2L12Q9HB09 334 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 NARFQ9UHQ1 456 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 CD2APQ9Y5K6 639 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 SLX4Q8IY92 1834 aa6.94□□□□□ -1.3
SND1-207ENST00000468621 MYH3P11055 1940 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 NBPF26B4DH59 902 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 ZPR1O75312 459 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 CAPN15O75808 1086 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 RLBP1P12271 317 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 TM4SF1P30408 202 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 IL6STP40189 918 aaPredicted RBP6.93□□□□□ -1.3
SND1-207ENST00000468621 LMOD3Q0VAK6 560 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
SND1-207ENST00000468621 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 SLKQ9H2G2 1235 aaPredicted RBP6.93□□□□□ -1.3
SND1-207ENST00000468621 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
SND1-207ENST00000468621 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
SND1-207ENST00000468621 CHL1O00533 1208 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 YBX3P16989 372 aaKnown RBP eCLIP6.92□□□□□ -1.34e-12■■□□□ 14.5
SND1-207ENST00000468621 HSPA6P17066 643 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 NFIXQ14938 502 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 ZNF526Q8TF50 670 aaPredicted RBP6.92□□□□□ -1.3
SND1-207ENST00000468621 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 ANTXR1Q9H6X2 564 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
SND1-207ENST00000468621 SMC4Q9NTJ3 1288 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 BABAM1Q9NWV8 329 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 CHMP5Q9NZZ3 219 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 TSPYL4Q9UJ04 414 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 DDX19BQ9UMR2 479 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
SND1-207ENST00000468621 TNRC6CQ9HCJ0 1690 aaKnown RBP6.92□□□□□ -1.3
SND1-207ENST00000468621 IL16Q14005 1332 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms