RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 MTFR1Q15390 333 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 ZNF417Q8TAU3 575 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 ZNF587Q96SQ5 575 aaPredicted RBP8.27□□□□□ -1.09
SSB-208ENST00000468600 STARD13Q9Y3M8 1113 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 EFSO43281 561 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 NID1P14543 1247 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 VAC14Q08AM6 782 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 IRF5Q13568 498 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 SLC4A9Q96Q91 983 aa8.26□□□□□ -1.09
SSB-208ENST00000468600 IQSEC3Q9UPP2 1182 aaPredicted RBP8.26□□□□□ -1.09
SSB-208ENST00000468600 TMEM229AB2RXF0 380 aa8.25□□□□□ -1.09
SSB-208ENST00000468600 ALBP02768 609 aa8.25□□□□□ -1.09
SSB-208ENST00000468600 TRIM28Q13263 835 aaKnown RBP8.25□□□□□ -1.09
SSB-208ENST00000468600 TPRNQ4KMQ1 711 aa8.25□□□□□ -1.09
SSB-208ENST00000468600 C8orf86Q6ZUL3 223 aa8.25□□□□□ -1.09
SSB-208ENST00000468600 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
SSB-208ENST00000468600 BACH1O14867 736 aa8.24□□□□□ -1.09
SSB-208ENST00000468600 COBLO75128 1261 aa8.24□□□□□ -1.09
SSB-208ENST00000468600 SELPP16109 830 aa8.24□□□□□ -1.09
SSB-208ENST00000468600 ARID1BQ8NFD5 2236 aaPredicted RBP8.23□□□□□ -1.09
SSB-208ENST00000468600 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 SIN3BO75182 1162 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 WASHC4Q2M389 1173 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 TXNRD3Q86VQ6 643 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 NEUROD4Q9HD90 331 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 USP3Q9Y6I4 520 aa8.23□□□□□ -1.09
SSB-208ENST00000468600 COL17A1Q9UMD9 1497 aaPredicted RBP8.23□□□□□ -1.09
SSB-208ENST00000468600 C9orf172C9J069 976 aa8.22□□□□□ -1.09
SSB-208ENST00000468600 SOX11P35716 441 aa8.22□□□□□ -1.09
SSB-208ENST00000468600 MICALL1Q8N3F8 863 aa8.22□□□□□ -1.09
SSB-208ENST00000468600 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
SSB-208ENST00000468600 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
SSB-208ENST00000468600 ELNP15502 786 aa8.21□□□□□ -1.1
SSB-208ENST00000468600 ABL2P42684 1182 aa8.21□□□□□ -1.1
SSB-208ENST00000468600 NEUROD1Q13562 356 aa8.21□□□□□ -1.1
SSB-208ENST00000468600 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
SSB-208ENST00000468600 TXLNAP40222 546 aa8.2□□□□□ -1.1
SSB-208ENST00000468600 PSME1Q06323 249 aa8.2□□□□□ -1.1
SSB-208ENST00000468600 EML3Q32P44 896 aa8.2□□□□□ -1.1
SSB-208ENST00000468600 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
SSB-208ENST00000468600 KRTAP4-9Q9BYQ8 210 aa8.2□□□□□ -1.1
SSB-208ENST00000468600 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
SSB-208ENST00000468600 PAX4O43316 350 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
SSB-208ENST00000468600 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 TP53INP1Q96A56 240 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 GDPD2Q9HCC8 539 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
SSB-208ENST00000468600 TXKP42681 527 aa8.18□□□□□ -1.1
SSB-208ENST00000468600 C20orf204Q6ZNR8 217 aa8.18□□□□□ -1.1
SSB-208ENST00000468600 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
SSB-208ENST00000468600 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
SSB-208ENST00000468600 NOD1Q9Y239 953 aa8.18□□□□□ -1.1
SSB-208ENST00000468600 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
SSB-208ENST00000468600 ADH7P40394 386 aa8.17□□□□□ -1.1
SSB-208ENST00000468600 GTF2IP78347 998 aa8.17□□□□□ -1.1
SSB-208ENST00000468600 TEAD4Q15561 434 aa8.17□□□□□ -1.1
SSB-208ENST00000468600 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
SSB-208ENST00000468600 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
SSB-208ENST00000468600 NOS2P35228 1153 aa8.16□□□□□ -1.1
SSB-208ENST00000468600 ZDHHC1Q8WTX9 485 aa8.16□□□□□ -1.1
SSB-208ENST00000468600 A0A0A0MRY4 1105 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 EML1O00423 815 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
SSB-208ENST00000468600 SPEM2Q0P670 501 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 SFSWAPQ12872 951 aaKnown RBP8.15□□□□□ -1.1
SSB-208ENST00000468600 SLC9A9Q8IVB4 645 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 RHPN1Q8TCX5 695 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 SLC30A3Q99726 388 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 ZNF358Q9NW07 568 aa8.15□□□□□ -1.1
SSB-208ENST00000468600 LZTS3O60299 673 aaPredicted RBP8.14□□□□□ -1.11
SSB-208ENST00000468600 SKIP12755 728 aa8.14□□□□□ -1.11
SSB-208ENST00000468600 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
SSB-208ENST00000468600 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
SSB-208ENST00000468600 SERTM1A2A2V5 107 aa8.13□□□□□ -1.11
SSB-208ENST00000468600 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
SSB-208ENST00000468600 BRD7Q9NPI1 651 aa8.13□□□□□ -1.11
SSB-208ENST00000468600 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
SSB-208ENST00000468600 LILRB5O75023 590 aa8.12□□□□□ -1.11
SSB-208ENST00000468600 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
SSB-208ENST00000468600 CEP63Q96MT8 703 aa8.12□□□□□ -1.11
SSB-208ENST00000468600 EPHA4P54764 986 aa8.11□□□□□ -1.11
SSB-208ENST00000468600 NCOA4Q13772 614 aa8.11□□□□□ -1.11
SSB-208ENST00000468600 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
SSB-208ENST00000468600 ANKIB1Q9P2G1 1089 aa8.11□□□□□ -1.11
SSB-208ENST00000468600 PSMA6P60900 246 aaKnown RBP8.1□□□□□ -1.11
SSB-208ENST00000468600 RAC1P63000 192 aa8.1□□□□□ -1.11
SSB-208ENST00000468600 KRTAP4-2Q9BYR5 136 aa8.1□□□□□ -1.11
SSB-208ENST00000468600 TBC1D8BQ0IIM8 1120 aa8.09□□□□□ -1.11
SSB-208ENST00000468600 TNS4Q8IZW8 715 aa8.09□□□□□ -1.11
SSB-208ENST00000468600 NFATC2IPQ8NCF5 419 aa8.09□□□□□ -1.11
SSB-208ENST00000468600 PCMTD2Q9NV79 361 aa8.09□□□□□ -1.11
SSB-208ENST00000468600 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
SSB-208ENST00000468600 FZD5Q13467 585 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 SH3PXD2AQ5TCZ1 1133 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 C1orf53Q5VUE5 145 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms