RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 C2orf49Q9BVC5 232 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 ARHGEF10LQ9HCE6 1279 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 WWC3Q9ULE0 1092 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 HCN4Q9Y3Q4 1203 aa5.62□□□□□ -1.51
HMGB1P25-201ENST00000468402 SERTM1A2A2V5 107 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 EPHA4P54764 986 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 SKOR1P84550 965 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 DSC3Q14574 896 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 PPP1R26Q5T8A7 1209 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 RNF34Q969K3 372 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 CCSER2Q9H7U1 834 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 CAPN10Q9HC96 672 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 PGPEP1Q9NXJ5 209 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 CABP1Q9NZU7 370 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 POLIQ9UNA4 740 aa5.61□□□□□ -1.51
HMGB1P25-201ENST00000468402 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 TNFRSF10BO14763 440 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 ZBTB39O15060 712 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 SMARCA5O60264 1052 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 USP5P45974 858 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 TMC4Q7Z404 712 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 NPAS3Q8IXF0 933 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 EDEM1Q92611 657 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 RNF19AQ9NV58 838 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 TLL2Q9Y6L7 1015 aa5.6□□□□□ -1.51
HMGB1P25-201ENST00000468402 CDK2AP1O14519 115 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 GPR182O15218 404 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 MAN1A2O60476 641 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 GTF2E1P29083 439 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 ZNF76P36508 570 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 GRM5P41594 1212 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 DAB2P98082 770 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 FOXK2Q01167 660 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 DGKZQ13574 1117 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 GNL2Q13823 731 aaKnown RBP5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 C8orf34Q49A92 452 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 ALG1LQ6GMV1 187 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 STAG2Q8N3U4 1231 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 CNKSR1Q969H4 720 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 ZFP42Q96MM3 310 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 CDK15Q96Q40 435 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 SETDB2Q96T68 719 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 QTRT2Q9H974 415 aaKnown RBP5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 LRFN2Q9ULH4 789 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 PARP3Q9Y6F1 533 aa5.59□□□□□ -1.51
HMGB1P25-201ENST00000468402 H3BM21 787 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 RNF225M0QZC1 329 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 LILRA1O75019 489 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 UPP2O95045 317 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 MZF1P28698 734 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 ADD1P35611 737 aaKnown RBP5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 C11orf91Q3C1V1 193 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 ALDH16A1Q8IZ83 802 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 NBPF15Q8N660 670 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 XAGE2Q96GT9 111 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 NLRP3Q96P20 1036 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 FAM129BQ96TA1 746 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 KLK14Q9P0G3 267 aa5.58□□□□□ -1.52
HMGB1P25-201ENST00000468402 ERBB4Q15303 1308 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 MEN1O00255 615 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 ADH1CP00326 375 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 IL2RAP01589 272 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 NEFLP07196 543 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 NOS2P35228 1153 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 ZAP70P43403 619 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 NR5A1Q13285 461 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 MTFR1Q15390 333 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 ENOX2Q16206 610 aaKnown RBP5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 TMEM151AQ8N4L1 468 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 GPR152Q8TDT2 470 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 L3MBTL2Q969R5 705 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 MYO19Q96H55 970 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 ESYT1Q9BSJ8 1104 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 PRKAG2Q9UGJ0 569 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 EMILIN1Q9Y6C2 1016 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 USP3Q9Y6I4 520 aa5.57□□□□□ -1.52
HMGB1P25-201ENST00000468402 SOBPA7XYQ1 873 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 PPM1GO15355 546 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 GDF11O95390 407 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 PDGFAP04085 211 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 GTF2F1P35269 517 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 FANCCQ00597 558 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 CENPCQ03188 943 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 C6orf118Q5T5N4 469 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 SH3PXD2AQ5TCZ1 1133 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 TMEM214Q6NUQ4 689 aaKnown RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 TRIM46Q7Z4K8 759 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 ALKBH8Q96BT7 664 aaKnown RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 DNAJC2Q99543 621 aaKnown RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 PHACTR1Q9C0D0 580 aa5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 METTL5Q9NRN9 209 aaKnown RBP5.56□□□□□ -1.52
HMGB1P25-201ENST00000468402 EML1O00423 815 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 GNA15P30679 374 aa5.55□□□□□ -1.52
HMGB1P25-201ENST00000468402 DNAJA1P31689 397 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms