RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 NECTIN2Q92692 538 aa25.87■■□□□ 1.73
NPHP4-206ENST00000468253 C4AP0C0L4 1744 aa25.86■■□□□ 1.73
NPHP4-206ENST00000468253 DCAF8L1A6NGE4 600 aa25.86■■□□□ 1.73
NPHP4-206ENST00000468253 CCDC30Q5VVM6 783 aa25.86■■□□□ 1.73
NPHP4-206ENST00000468253 SPINK5Q9NQ38 1064 aaPredicted RBP25.86■■□□□ 1.73
NPHP4-206ENST00000468253 CHPF2Q9P2E5 772 aa25.86■■□□□ 1.73
NPHP4-206ENST00000468253 HLFQ16534 295 aa25.85■■□□□ 1.73
NPHP4-206ENST00000468253 COPS6Q7L5N1 327 aa25.85■■□□□ 1.73
NPHP4-206ENST00000468253 TSPYL6Q8N831 410 aa25.85■■□□□ 1.73
NPHP4-206ENST00000468253 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
NPHP4-206ENST00000468253 TWISTNBQ3B726 338 aaPredicted RBP25.84■■□□□ 1.73
NPHP4-206ENST00000468253 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
NPHP4-206ENST00000468253 NLGN2Q8NFZ4 835 aa25.84■■□□□ 1.73
NPHP4-206ENST00000468253 ANXA1P04083 346 aa25.83■■□□□ 1.73
NPHP4-206ENST00000468253 GIGYF2Q6Y7W6 1299 aaKnown RBP25.83■■□□□ 1.73
NPHP4-206ENST00000468253 LAMB4A4D0S4 1761 aa25.82■■□□□ 1.72
NPHP4-206ENST00000468253 E9PSI1 815 aa25.82■■□□□ 1.72
NPHP4-206ENST00000468253 XAGE3Q8WTP9 111 aa25.82■■□□□ 1.72
NPHP4-206ENST00000468253 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
NPHP4-206ENST00000468253 VAMP4O75379 141 aa25.81■■□□□ 1.72
NPHP4-206ENST00000468253 NIP7Q9Y221 180 aaKnown RBP eCLIP25.81■■□□□ 1.72
NPHP4-206ENST00000468253 EXOSC9Q06265 439 aaKnown RBP25.8■■□□□ 1.72
NPHP4-206ENST00000468253 TPTE2Q6XPS3 522 aa25.8■■□□□ 1.72
NPHP4-206ENST00000468253 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
NPHP4-206ENST00000468253 AIMP1Q12904 312 aaKnown RBP25.79■■□□□ 1.72
NPHP4-206ENST00000468253 ANKRD13DQ6ZTN6 518 aa25.79■■□□□ 1.72
NPHP4-206ENST00000468253 ZNF34Q8IZ26 560 aa25.79■■□□□ 1.72
NPHP4-206ENST00000468253 ZBTB3Q9H5J0 574 aa25.79■■□□□ 1.72
NPHP4-206ENST00000468253 PDZRN3Q9UPQ7 1066 aa25.79■■□□□ 1.72
NPHP4-206ENST00000468253 SLFN5Q08AF3 891 aa25.78■■□□□ 1.72
NPHP4-206ENST00000468253 HSP90AB3PQ58FF7 597 aa25.78■■□□□ 1.72
NPHP4-206ENST00000468253 PLBD2Q8NHP8 589 aa25.78■■□□□ 1.72
NPHP4-206ENST00000468253 BRIP1Q9BX63 1249 aa25.78■■□□□ 1.72
NPHP4-206ENST00000468253 STK31Q9BXU1 1019 aa25.77■■□□□ 1.72
NPHP4-206ENST00000468253 PRR5LQ6MZQ0 368 aa25.76■■□□□ 1.71
NPHP4-206ENST00000468253 NBPF5PQ86XG9 351 aaPredicted RBP25.76■■□□□ 1.71
NPHP4-206ENST00000468253 TRMT2AQ8IZ69 625 aaKnown RBP25.76■■□□□ 1.71
NPHP4-206ENST00000468253 ATP10DQ9P241 1426 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 A0A0G2JLW4 131 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 TCIRG1Q13488 830 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 PARP10Q53GL7 1025 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 CNBD1Q8NA66 436 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 NYXQ9GZU5 481 aa25.75■■□□□ 1.71
NPHP4-206ENST00000468253 DPEP1P16444 411 aa25.74■■□□□ 1.71
NPHP4-206ENST00000468253 KCNA3P22001 575 aa25.74■■□□□ 1.71
NPHP4-206ENST00000468253 GPR162Q16538 588 aa25.74■■□□□ 1.71
NPHP4-206ENST00000468253 GRIN3BO60391 1043 aa25.73■■□□□ 1.71
NPHP4-206ENST00000468253 SLC4A2P04920 1241 aa25.73■■□□□ 1.71
NPHP4-206ENST00000468253 PDE6BP35913 854 aa25.73■■□□□ 1.71
NPHP4-206ENST00000468253 ST5P78524 1137 aa25.73■■□□□ 1.71
NPHP4-206ENST00000468253 SCN7AQ01118 1682 aa25.72■■□□□ 1.71
NPHP4-206ENST00000468253 DDX58O95786 925 aaKnown RBP25.72■■□□□ 1.71
NPHP4-206ENST00000468253 TRIM28Q13263 835 aaKnown RBP25.72■■□□□ 1.71
NPHP4-206ENST00000468253 PHAXQ9H814 394 aaKnown RBP25.72■■□□□ 1.71
NPHP4-206ENST00000468253 NPHP1O15259 732 aa25.71■■□□□ 1.71
NPHP4-206ENST00000468253 PPP1R42Q7Z4L9 355 aa25.71■■□□□ 1.71
NPHP4-206ENST00000468253 PIM2Q9P1W9 311 aa25.71■■□□□ 1.71
NPHP4-206ENST00000468253 KLRG2A4D1S0 409 aaPredicted RBP25.7■■□□□ 1.7
NPHP4-206ENST00000468253 H0YIN7 160 aa25.7■■□□□ 1.7
NPHP4-206ENST00000468253 PXDNLA1KZ92 1463 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 GPTP24298 496 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 GTF2E1P29083 439 aaPredicted RBP25.69■■□□□ 1.7
NPHP4-206ENST00000468253 SUSD4Q5VX71 490 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 RIC3Q7Z5B4 369 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 ZNF428Q96B54 188 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 CDCA7LQ96GN5 454 aa25.69■■□□□ 1.7
NPHP4-206ENST00000468253 IBTKQ9P2D0 1353 aaPredicted RBP25.69■■□□□ 1.7
NPHP4-206ENST00000468253 UBN2Q6ZU65 1347 aa25.68■■□□□ 1.7
NPHP4-206ENST00000468253 ISCA1Q9BUE6 129 aa25.68■■□□□ 1.7
NPHP4-206ENST00000468253 NRXN2Q9P2S2 1712 aa25.68■■□□□ 1.7
NPHP4-206ENST00000468253 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 BCORQ6W2J9 1755 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 KSR2Q6VAB6 950 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 NLRP10Q86W26 655 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 C2CD5Q86YS7 1000 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 UTP14AQ9BVJ6 771 aaKnown RBP25.67■■□□□ 1.7
NPHP4-206ENST00000468253 KIF13BQ9NQT8 1826 aa25.67■■□□□ 1.7
NPHP4-206ENST00000468253 YBX3P16989 372 aaKnown RBP eCLIP25.66■■□□□ 1.7
NPHP4-206ENST00000468253 CHRNA5P30532 468 aa25.66■■□□□ 1.7
NPHP4-206ENST00000468253 SLC10A5Q5PT55 438 aa25.66■■□□□ 1.7
NPHP4-206ENST00000468253 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
NPHP4-206ENST00000468253 NTSR2O95665 410 aa25.65■■□□□ 1.7
NPHP4-206ENST00000468253 CT47B1P0C2W7 299 aaPredicted RBP25.65■■□□□ 1.7
NPHP4-206ENST00000468253 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
NPHP4-206ENST00000468253 DALRD3Q5D0E6 543 aaKnown RBP25.65■■□□□ 1.7
NPHP4-206ENST00000468253 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
NPHP4-206ENST00000468253 FAM177BA6PVY3 158 aa25.64■■□□□ 1.7
NPHP4-206ENST00000468253 CCDC24Q8N4L8 307 aa25.64■■□□□ 1.7
NPHP4-206ENST00000468253 METTL22Q9BUU2 404 aaPredicted RBP25.64■■□□□ 1.7
NPHP4-206ENST00000468253 SRGNP10124 158 aa25.63■■□□□ 1.69
NPHP4-206ENST00000468253 FLIIQ13045 1269 aa25.63■■□□□ 1.69
NPHP4-206ENST00000468253 G2E3Q7L622 706 aa25.63■■□□□ 1.69
NPHP4-206ENST00000468253 PI4KAP2A4QPH2 592 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 ERFEQ4G0M1 354 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 STYK1Q6J9G0 422 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 TTLL6Q8N841 843 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 PI4KAP1Q8N8J0 262 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
NPHP4-206ENST00000468253 NUTM1Q86Y26 1132 aa25.61■■□□□ 1.69
NPHP4-206ENST00000468253 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms