RNA–Protein interactions for RNA: ENST00000468079.1

CFHR1-203, Transcript of complement factor H related 1, humanhuman

TSL 2

Gene CFHR1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-203ENST00000468079 PCDHGA11Q9Y5H2 935 aa8.36□□□□□ -1.07
CFHR1-203ENST00000468079 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
CFHR1-203ENST00000468079 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
CFHR1-203ENST00000468079 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
CFHR1-203ENST00000468079 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
CFHR1-203ENST00000468079 PLEKHM2Q8IWE5 1019 aa8.35□□□□□ -1.07
CFHR1-203ENST00000468079 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
CFHR1-203ENST00000468079 A0A1W2PNR3 127 aa8.34□□□□□ -1.07
CFHR1-203ENST00000468079 ATP9BO43861 1147 aa8.34□□□□□ -1.07
CFHR1-203ENST00000468079 GTF2IP78347 998 aa8.34□□□□□ -1.07
CFHR1-203ENST00000468079 PRSS36Q5K4E3 855 aa8.34□□□□□ -1.07
CFHR1-203ENST00000468079 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
CFHR1-203ENST00000468079 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
CFHR1-203ENST00000468079 TMEM229AB2RXF0 380 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 SMTNP53814 917 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 PRRT3Q5FWE3 981 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 ARSJQ5FYB0 599 aaPredicted RBP8.33□□□□□ -1.08
CFHR1-203ENST00000468079 TRIM50Q86XT4 487 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 DEPDC4Q8N2C3 294 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 PBXIP1Q96AQ6 731 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
CFHR1-203ENST00000468079 USP17L3A6NCW0 530 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 USP17L4A6NCW7 530 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 APBA3O96018 575 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
CFHR1-203ENST00000468079 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
CFHR1-203ENST00000468079 BACH1O14867 736 aa8.31□□□□□ -1.08
CFHR1-203ENST00000468079 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
CFHR1-203ENST00000468079 ATP1A2P50993 1020 aa8.31□□□□□ -1.08
CFHR1-203ENST00000468079 PSME1Q06323 249 aa8.31□□□□□ -1.08
CFHR1-203ENST00000468079 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
CFHR1-203ENST00000468079 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
CFHR1-203ENST00000468079 SERTAD1Q9UHV2 236 aa8.31□□□□□ -1.08
CFHR1-203ENST00000468079 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
CFHR1-203ENST00000468079 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
CFHR1-203ENST00000468079 MTFR1Q15390 333 aa8.3□□□□□ -1.08
CFHR1-203ENST00000468079 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
CFHR1-203ENST00000468079 MAFBQ9Y5Q3 323 aaPredicted RBP8.3□□□□□ -1.08
CFHR1-203ENST00000468079 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
CFHR1-203ENST00000468079 A6NJY4 79 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
CFHR1-203ENST00000468079 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 CDK2AP1O14519 115 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 ALAS2P22557 587 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 RFX1P22670 979 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 NBPF1Q3BBV0 1214 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
CFHR1-203ENST00000468079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
CFHR1-203ENST00000468079 LMOD1P29536 600 aaPredicted RBP8.28□□□□□ -1.08
CFHR1-203ENST00000468079 RETREG2Q8NC44 543 aa8.28□□□□□ -1.08
CFHR1-203ENST00000468079 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
CFHR1-203ENST00000468079 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
CFHR1-203ENST00000468079 TRAIPQ9BWF2 469 aa8.28□□□□□ -1.08
CFHR1-203ENST00000468079 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
CFHR1-203ENST00000468079 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
CFHR1-203ENST00000468079 FAM157BP0CG42 384 aa8.27□□□□□ -1.09
CFHR1-203ENST00000468079 TATP17735 454 aaPredicted RBP8.27□□□□□ -1.09
CFHR1-203ENST00000468079 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
CFHR1-203ENST00000468079 GRIK4Q16099 956 aa8.27□□□□□ -1.09
CFHR1-203ENST00000468079 MARK1Q9P0L2 795 aa8.27□□□□□ -1.09
CFHR1-203ENST00000468079 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
CFHR1-203ENST00000468079 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
CFHR1-203ENST00000468079 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
CFHR1-203ENST00000468079 CLDN10P78369 228 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 PDE4CQ08493 712 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
CFHR1-203ENST00000468079 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 LARGE2Q8N3Y3 721 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 OGFOD1Q8N543 542 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 NACC1Q96RE7 527 aa8.26□□□□□ -1.09
CFHR1-203ENST00000468079 M0R082 166 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 CCDC102BQ68D86 513 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 C8orf86Q6ZUL3 223 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 ZNF295-AS1Q8N0V1 137 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 ZNF417Q8TAU3 575 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 ZNF587Q96SQ5 575 aaPredicted RBP8.25□□□□□ -1.09
CFHR1-203ENST00000468079 MDFIQ99750 246 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 CABP1Q9NZU7 370 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
CFHR1-203ENST00000468079 KIAA1024Q9UPX6 916 aa8.25□□□□□ -1.09
CFHR1-203ENST00000468079 HYAL3O43820 417 aaPredicted RBP8.24□□□□□ -1.09
CFHR1-203ENST00000468079 LRP8Q14114 963 aa8.24□□□□□ -1.09
CFHR1-203ENST00000468079 SIX5Q8N196 739 aa8.24□□□□□ -1.09
CFHR1-203ENST00000468079 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
CFHR1-203ENST00000468079 KRTAP4-8A0A0G2JLE6 195 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 M0R2N6 131 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 EFSO43281 561 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 ATG7O95352 703 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 EPHA4P54764 986 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 LAMC2Q13753 1193 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 GOLGA2P5Q9HBQ8 144 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 ZDHHC3Q9NYG2 299 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 STARD13Q9Y3M8 1113 aa8.23□□□□□ -1.09
CFHR1-203ENST00000468079 RBM19Q9Y4C8 960 aaKnown RBP8.23□□□□□ -1.09
CFHR1-203ENST00000468079 SAMD5Q5TGI4 173 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms