RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
SYN3-209ENST00000467824 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
SYN3-209ENST00000467824 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYN3-209ENST00000467824 RIPK4P57078 832 aa12.77□□□□□ -0.37
SYN3-209ENST00000467824 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
SYN3-209ENST00000467824 TPTE2Q6XPS3 522 aa12.77□□□□□ -0.37
SYN3-209ENST00000467824 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
SYN3-209ENST00000467824 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
SYN3-209ENST00000467824 SRGNP10124 158 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
SYN3-209ENST00000467824 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 DLEC1Q9Y238 1755 aa12.76□□□□□ -0.37
SYN3-209ENST00000467824 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
SYN3-209ENST00000467824 NFKBIEO00221 500 aa12.75□□□□□ -0.37
SYN3-209ENST00000467824 C21orf2O43822 256 aa12.75□□□□□ -0.37
SYN3-209ENST00000467824 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
SYN3-209ENST00000467824 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
SYN3-209ENST00000467824 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
SYN3-209ENST00000467824 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 NPR1P16066 1061 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
SYN3-209ENST00000467824 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 NYXQ9GZU5 481 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
SYN3-209ENST00000467824 RRP7AQ9Y3A4 280 aaKnown RBP12.74□□□□□ -0.37
SYN3-209ENST00000467824 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
SYN3-209ENST00000467824 MYL6BP14649 208 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 APLP1P51693 650 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 FSTL1Q12841 308 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 HLFQ16534 295 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 KDM3BQ7LBC6 1761 aa12.73□□□□□ -0.37
SYN3-209ENST00000467824 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
SYN3-209ENST00000467824 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
SYN3-209ENST00000467824 IBTKQ9P2D0 1353 aaPredicted RBP12.71□□□□□ -0.37
SYN3-209ENST00000467824 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
SYN3-209ENST00000467824 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
SYN3-209ENST00000467824 PRELPP51888 382 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 HTRA3P83110 453 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 ERFEQ4G0M1 354 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 SBF1O95248 1867 aa12.71□□□□□ -0.37
SYN3-209ENST00000467824 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.38
SYN3-209ENST00000467824 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
SYN3-209ENST00000467824 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
SYN3-209ENST00000467824 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
SYN3-209ENST00000467824 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
SYN3-209ENST00000467824 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
SYN3-209ENST00000467824 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
SYN3-209ENST00000467824 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
SYN3-209ENST00000467824 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
SYN3-209ENST00000467824 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
SYN3-209ENST00000467824 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
SYN3-209ENST00000467824 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
SYN3-209ENST00000467824 CHL1O00533 1208 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 GPTP24298 496 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 CRY2Q49AN0 593 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
SYN3-209ENST00000467824 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
SYN3-209ENST00000467824 UBN2Q6ZU65 1347 aa12.67□□□□□ -0.38
SYN3-209ENST00000467824 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
SYN3-209ENST00000467824 HSP90AB3PQ58FF7 597 aa12.67□□□□□ -0.38
SYN3-209ENST00000467824 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
SYN3-209ENST00000467824 ZNF34Q8IZ26 560 aa12.67□□□□□ -0.38
SYN3-209ENST00000467824 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
SYN3-209ENST00000467824 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
SYN3-209ENST00000467824 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 HOXB7P09629 217 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
SYN3-209ENST00000467824 PDIA6Q15084 440 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 DNAJC5GQ8N7S2 189 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
SYN3-209ENST00000467824 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
SYN3-209ENST00000467824 NTSR2O95665 410 aa12.65□□□□□ -0.38
SYN3-209ENST00000467824 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
SYN3-209ENST00000467824 ZEB1P37275 1124 aaPredicted RBP12.65□□□□□ -0.38
SYN3-209ENST00000467824 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
SYN3-209ENST00000467824 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
SYN3-209ENST00000467824 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.38
SYN3-209ENST00000467824 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms