RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 NBPF5PQ86XG9 351 aaPredicted RBP19.51■□□□□ 0.71
ATPAF2-204ENST00000467560 NIP7Q9Y221 180 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATPAF2-204ENST00000467560 LAMB4A4D0S4 1761 aa19.51■□□□□ 0.71
ATPAF2-204ENST00000467560 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
ATPAF2-204ENST00000467560 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 TOMM70O94826 608 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 SRGNP10124 158 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 LMNB1P20700 586 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 ST5P78524 1137 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 CCDC146Q8IYE0 955 aa19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 RRP7AQ9Y3A4 280 aaKnown RBP19.5■□□□□ 0.71
ATPAF2-204ENST00000467560 TMPOP42166 694 aaKnown RBP19.49■□□□□ 0.71
ATPAF2-204ENST00000467560 RRAGCQ9HB90 399 aa19.49■□□□□ 0.71
ATPAF2-204ENST00000467560 ZNF652Q9Y2D9 606 aa19.49■□□□□ 0.71
ATPAF2-204ENST00000467560 NPHP1O15259 732 aa19.48■□□□□ 0.71
ATPAF2-204ENST00000467560 PRPF40BQ6NWY9 871 aaKnown RBP19.48■□□□□ 0.71
ATPAF2-204ENST00000467560 PDZRN3Q9UPQ7 1066 aa19.48■□□□□ 0.71
ATPAF2-204ENST00000467560 SLX4Q8IY92 1834 aa19.47■□□□□ 0.71
ATPAF2-204ENST00000467560 RGL2O15211 777 aa19.47■□□□□ 0.71
ATPAF2-204ENST00000467560 MYL6BP14649 208 aa19.47■□□□□ 0.71
ATPAF2-204ENST00000467560 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
ATPAF2-204ENST00000467560 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
ATPAF2-204ENST00000467560 KLRG2A4D1S0 409 aaPredicted RBP19.46■□□□□ 0.71
ATPAF2-204ENST00000467560 C7orf43Q8WVR3 580 aa19.46■□□□□ 0.71
ATPAF2-204ENST00000467560 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
ATPAF2-204ENST00000467560 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
ATPAF2-204ENST00000467560 PDIA6Q15084 440 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 LRP10Q7Z4F1 713 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 CNKSR1Q969H4 720 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 MAP3K15Q6ZN16 1313 aa19.45■□□□□ 0.7
ATPAF2-204ENST00000467560 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 PROSER3Q2NL68 480 aa19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 ZC3H4Q9UPT8 1303 aaKnown RBP19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 ABCC12Q96J65 1359 aa19.44■□□□□ 0.7
ATPAF2-204ENST00000467560 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 GLTPD2A6NH11 291 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 ERVV-1B6SEH8 477 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 ANXA1P04083 346 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 GPTP24298 496 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 KRT24Q2M2I5 525 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 NUTM1Q86Y26 1132 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 RBM46Q8TBY0 533 aaKnown RBP19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 UBN2Q6ZU65 1347 aa19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
ATPAF2-204ENST00000467560 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
ATPAF2-204ENST00000467560 CCDC88AQ3V6T2 1871 aa19.42■□□□□ 0.7
ATPAF2-204ENST00000467560 POTECB2RU33 542 aa19.42■□□□□ 0.7
ATPAF2-204ENST00000467560 PRKRIP1Q9H875 184 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-204ENST00000467560 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
ATPAF2-204ENST00000467560 NPR1P16066 1061 aa19.41■□□□□ 0.7
ATPAF2-204ENST00000467560 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
ATPAF2-204ENST00000467560 ERFEQ4G0M1 354 aa19.41■□□□□ 0.7
ATPAF2-204ENST00000467560 TAOK3Q9H2K8 898 aa19.41■□□□□ 0.7
ATPAF2-204ENST00000467560 ARFGEF2Q9Y6D5 1785 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 NUP98P52948 1817 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 HTRA3P83110 453 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 SUSD4Q5VX71 490 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 ZNF34Q8IZ26 560 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 NECTIN2Q92692 538 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 LTBP3Q9NS15 1303 aa19.4■□□□□ 0.7
ATPAF2-204ENST00000467560 BABAM1Q9NWV8 329 aa19.39■□□□□ 0.69
ATPAF2-204ENST00000467560 ERBB4Q15303 1308 aa19.39■□□□□ 0.69
ATPAF2-204ENST00000467560 CHL1O00533 1208 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 APLP1P51693 650 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 C3orf67Q6ZVT6 689 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 DNAJC5GQ8N7S2 189 aa19.38■□□□□ 0.69
ATPAF2-204ENST00000467560 GIGYF2Q6Y7W6 1299 aaKnown RBP19.37■□□□□ 0.69
ATPAF2-204ENST00000467560 NTSR2O95665 410 aa19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 VEGFAP15692 232 aaPredicted RBP19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 FSTL1Q12841 308 aa19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 CCDC93Q567U6 631 aa19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 LAS1LQ9Y4W2 734 aaKnown RBP19.36■□□□□ 0.69
ATPAF2-204ENST00000467560 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
ATPAF2-204ENST00000467560 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
ATPAF2-204ENST00000467560 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
ATPAF2-204ENST00000467560 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
ATPAF2-204ENST00000467560 DDNO94850 711 aaPredicted RBP19.34■□□□□ 0.69
ATPAF2-204ENST00000467560 COPS6Q7L5N1 327 aa19.34■□□□□ 0.69
ATPAF2-204ENST00000467560 XAGE3Q8WTP9 111 aa19.34■□□□□ 0.69
ATPAF2-204ENST00000467560 IBTKQ9P2D0 1353 aaPredicted RBP19.33■□□□□ 0.69
ATPAF2-204ENST00000467560 FKBP4Q02790 459 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATPAF2-204ENST00000467560 WDR90Q96KV7 1748 aa19.33■□□□□ 0.68
ATPAF2-204ENST00000467560 HOXA10P31260 410 aaPredicted RBP19.32■□□□□ 0.68
ATPAF2-204ENST00000467560 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms