RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TWISTNBQ3B726 338 aaPredicted RBP14.29□□□□□ -0.12
MSH5-212ENST00000467319 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
MSH5-212ENST00000467319 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
MSH5-212ENST00000467319 NECTIN2Q92692 538 aa14.29□□□□□ -0.12
MSH5-212ENST00000467319 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
MSH5-212ENST00000467319 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
MSH5-212ENST00000467319 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
MSH5-212ENST00000467319 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
MSH5-212ENST00000467319 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
MSH5-212ENST00000467319 ELL2O00472 640 aaPredicted RBP14.28□□□□□ -0.12
MSH5-212ENST00000467319 EXOSC9Q06265 439 aaKnown RBP14.28□□□□□ -0.12
MSH5-212ENST00000467319 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
MSH5-212ENST00000467319 TBC1D9BQ66K14 1250 aa14.28□□□□□ -0.12
MSH5-212ENST00000467319 NPM2Q86SE8 214 aaKnown RBP14.28□□□□□ -0.12
MSH5-212ENST00000467319 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
MSH5-212ENST00000467319 ANKRD31Q8N7Z5 1873 aa14.27□□□□□ -0.12
MSH5-212ENST00000467319 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
MSH5-212ENST00000467319 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.12
MSH5-212ENST00000467319 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
MSH5-212ENST00000467319 XAGE3Q8WTP9 111 aa14.27□□□□□ -0.13
MSH5-212ENST00000467319 HYPKQ9NX55 129 aa14.27□□□□□ -0.13
MSH5-212ENST00000467319 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.13
MSH5-212ENST00000467319 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.13
MSH5-212ENST00000467319 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 CACNA1FO60840 1977 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH5-212ENST00000467319 HLFQ16534 295 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 CCDC30Q5VVM6 783 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
MSH5-212ENST00000467319 BRCA1P38398 1863 aaKnown RBP14.26□□□□□ -0.13
MSH5-212ENST00000467319 COL11A2P13942 1736 aaPredicted RBP14.26□□□□□ -0.13
MSH5-212ENST00000467319 VAMP4O75379 141 aa14.25□□□□□ -0.13
MSH5-212ENST00000467319 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
MSH5-212ENST00000467319 SYT17Q9BSW7 474 aa14.25□□□□□ -0.13
MSH5-212ENST00000467319 ZBTB3Q9H5J0 574 aa14.25□□□□□ -0.13
MSH5-212ENST00000467319 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
MSH5-212ENST00000467319 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
MSH5-212ENST00000467319 UBN2Q6ZU65 1347 aa14.24□□□□□ -0.13
MSH5-212ENST00000467319 GIGYF2Q6Y7W6 1299 aaKnown RBP14.24□□□□□ -0.13
MSH5-212ENST00000467319 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
MSH5-212ENST00000467319 NLGN2Q8NFZ4 835 aa14.23□□□□□ -0.13
MSH5-212ENST00000467319 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
MSH5-212ENST00000467319 SERPINB2P05120 415 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 PLBD2Q8NHP8 589 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 SETDB2Q96T68 719 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
MSH5-212ENST00000467319 ADCY9O60503 1353 aa14.22□□□□□ -0.13
MSH5-212ENST00000467319 AIMP1Q12904 312 aaKnown RBP14.21□□□□□ -0.13
MSH5-212ENST00000467319 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSH5-212ENST00000467319 UTRNP46939 3433 aa14.21□□□□□ -0.13
MSH5-212ENST00000467319 LAMB2P55268 1798 aa14.21□□□□□ -0.13
MSH5-212ENST00000467319 ABCC12Q96J65 1359 aa14.21□□□□□ -0.14
MSH5-212ENST00000467319 G2E3Q7L622 706 aa14.2□□□□□ -0.14
MSH5-212ENST00000467319 CNBD1Q8NA66 436 aa14.2□□□□□ -0.14
MSH5-212ENST00000467319 ZNF428Q96B54 188 aa14.2□□□□□ -0.14
MSH5-212ENST00000467319 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
MSH5-212ENST00000467319 NTSR2O95665 410 aa14.19□□□□□ -0.14
MSH5-212ENST00000467319 CT47B1P0C2W7 299 aaPredicted RBP14.19□□□□□ -0.14
MSH5-212ENST00000467319 HSP90AB3PQ58FF7 597 aa14.19□□□□□ -0.14
MSH5-212ENST00000467319 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
MSH5-212ENST00000467319 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
MSH5-212ENST00000467319 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 GPTP24298 496 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 TGFB2P61812 414 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 FLIIQ13045 1269 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 NBPF5PQ86XG9 351 aaPredicted RBP14.18□□□□□ -0.14
MSH5-212ENST00000467319 ISCA1Q9BUE6 129 aa14.18□□□□□ -0.14
MSH5-212ENST00000467319 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
MSH5-212ENST00000467319 ARFGEF1Q9Y6D6 1849 aa14.17□□□□□ -0.14
MSH5-212ENST00000467319 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
MSH5-212ENST00000467319 KCNA3P22001 575 aa14.16□□□□□ -0.14
MSH5-212ENST00000467319 TRIM28Q13263 835 aaKnown RBP14.16□□□□□ -0.14
MSH5-212ENST00000467319 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
MSH5-212ENST00000467319 KSR2Q6VAB6 950 aa14.16□□□□□ -0.14
MSH5-212ENST00000467319 BRIP1Q9BX63 1249 aa14.16□□□□□ -0.14
MSH5-212ENST00000467319 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
MSH5-212ENST00000467319 KLRG2A4D1S0 409 aaPredicted RBP14.15□□□□□ -0.14
MSH5-212ENST00000467319 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 DPEP1P16444 411 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 ST5P78524 1137 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 TPTE2Q6XPS3 522 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 SSH1Q8WYL5 1049 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 METTL22Q9BUU2 404 aaPredicted RBP14.15□□□□□ -0.14
MSH5-212ENST00000467319 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
MSH5-212ENST00000467319 CHRNA5P30532 468 aa14.14□□□□□ -0.15
MSH5-212ENST00000467319 CCDC24Q8N4L8 307 aa14.14□□□□□ -0.15
MSH5-212ENST00000467319 MRPL50Q8N5N7 158 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms