RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 NOB1Q9ULX3 412 aaKnown RBP18.78■□□□□ 0.6
DDX56-208ENST00000467318 ERVV-1B6SEH8 477 aa18.77■□□□□ 0.6
DDX56-208ENST00000467318 RGL2O15211 777 aa18.77■□□□□ 0.6
DDX56-208ENST00000467318 PHF14O94880 888 aa18.77■□□□□ 0.6
DDX56-208ENST00000467318 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
DDX56-208ENST00000467318 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.77■□□□□ 0.6
DDX56-208ENST00000467318 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.59
DDX56-208ENST00000467318 ZPR1O75312 459 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 PLBD2Q8NHP8 589 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
DDX56-208ENST00000467318 NARFQ9UHQ1 456 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 TBC1D2BQ9UPU7 963 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 KSR2Q6VAB6 950 aa18.76■□□□□ 0.59
DDX56-208ENST00000467318 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 ZKSCAN2Q63HK3 967 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 RIC3Q7Z5B4 369 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 API5Q9BZZ5 524 aaKnown RBP18.75■□□□□ 0.59
DDX56-208ENST00000467318 PDGFDQ9GZP0 370 aaPredicted RBP18.75■□□□□ 0.59
DDX56-208ENST00000467318 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
DDX56-208ENST00000467318 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
DDX56-208ENST00000467318 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
DDX56-208ENST00000467318 COL23A1Q86Y22 540 aaPredicted RBP18.74■□□□□ 0.59
DDX56-208ENST00000467318 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
DDX56-208ENST00000467318 CAMTA2O94983 1202 aa18.73■□□□□ 0.59
DDX56-208ENST00000467318 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
DDX56-208ENST00000467318 QSER1Q2KHR3 1735 aa18.73■□□□□ 0.59
DDX56-208ENST00000467318 GIGYF2Q6Y7W6 1299 aaKnown RBP18.73■□□□□ 0.59
DDX56-208ENST00000467318 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
DDX56-208ENST00000467318 MS4A1P11836 297 aa18.72■□□□□ 0.59
DDX56-208ENST00000467318 TRIM27P14373 513 aa18.72■□□□□ 0.59
DDX56-208ENST00000467318 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
DDX56-208ENST00000467318 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
DDX56-208ENST00000467318 MAP3K2Q9Y2U5 619 aa18.72■□□□□ 0.59
DDX56-208ENST00000467318 ADCY9O60503 1353 aa18.71■□□□□ 0.59
DDX56-208ENST00000467318 PSDA5PKW4 1024 aaPredicted RBP18.71■□□□□ 0.59
DDX56-208ENST00000467318 MSH5O43196 834 aa18.71■□□□□ 0.59
DDX56-208ENST00000467318 USPL1Q5W0Q7 1092 aa18.71■□□□□ 0.59
DDX56-208ENST00000467318 NEXNQ0ZGT2 675 aa18.7■□□□□ 0.58
DDX56-208ENST00000467318 R3HDM1Q15032 1099 aaKnown RBP18.7■□□□□ 0.58
DDX56-208ENST00000467318 SLC16A10Q8TF71 515 aa18.7■□□□□ 0.58
DDX56-208ENST00000467318 METTL22Q9BUU2 404 aaPredicted RBP18.7■□□□□ 0.58
DDX56-208ENST00000467318 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
DDX56-208ENST00000467318 F6X3S4 739 aa18.69■□□□□ 0.58
DDX56-208ENST00000467318 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
DDX56-208ENST00000467318 HLFQ16534 295 aa18.69■□□□□ 0.58
DDX56-208ENST00000467318 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
DDX56-208ENST00000467318 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
DDX56-208ENST00000467318 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
DDX56-208ENST00000467318 PLIN1O60240 522 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 GYS1P13807 737 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
DDX56-208ENST00000467318 DZIP1LQ8IYY4 767 aaKnown RBP18.68■□□□□ 0.58
DDX56-208ENST00000467318 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
DDX56-208ENST00000467318 ABCC4O15439 1325 aa18.67■□□□□ 0.58
DDX56-208ENST00000467318 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
DDX56-208ENST00000467318 TRIM28Q13263 835 aaKnown RBP18.66■□□□□ 0.58
DDX56-208ENST00000467318 LINS1Q8NG48 757 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 CLUAP1Q96AJ1 413 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 MYD88Q99836 296 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 SCN7AQ01118 1682 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 CCT4P50991 539 aaKnown RBP18.66■□□□□ 0.58
DDX56-208ENST00000467318 BEND3Q5T5X7 828 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 ZNF34Q8IZ26 560 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 ARFGEF2Q9Y6D5 1785 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 NUP98P52948 1817 aa18.66■□□□□ 0.58
DDX56-208ENST00000467318 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
DDX56-208ENST00000467318 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
DDX56-208ENST00000467318 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
DDX56-208ENST00000467318 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
DDX56-208ENST00000467318 PARP10Q53GL7 1025 aa18.64■□□□□ 0.57
DDX56-208ENST00000467318 CCDC191Q8NCU4 936 aa18.64■□□□□ 0.57
DDX56-208ENST00000467318 SETDB2Q96T68 719 aa18.64■□□□□ 0.57
DDX56-208ENST00000467318 NIP7Q9Y221 180 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDX56-208ENST00000467318 IGKV5-2P06315 115 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 IBTKQ9P2D0 1353 aaPredicted RBP18.63■□□□□ 0.57
DDX56-208ENST00000467318 NEURL1BA8MQ27 555 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 MSL1Q68DK7 614 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 TNNQ9UQP3 1299 aa18.63■□□□□ 0.57
DDX56-208ENST00000467318 RLBP1P12271 317 aa18.62■□□□□ 0.57
DDX56-208ENST00000467318 GPTP24298 496 aa18.62■□□□□ 0.57
DDX56-208ENST00000467318 TM4SF1P30408 202 aa18.62■□□□□ 0.57
DDX56-208ENST00000467318 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
DDX56-208ENST00000467318 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
DDX56-208ENST00000467318 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
DDX56-208ENST00000467318 NFIXQ14938 502 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 BICDL1Q6ZP65 573 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 PANK1Q8TE04 598 aa18.61■□□□□ 0.57
DDX56-208ENST00000467318 MTFR1LQ9H019 292 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms