RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 Q6ZVU0 165 aa8.65□□□□□ -1.02
PTCD3-207ENST00000467273 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
PTCD3-207ENST00000467273 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 CTSOP43234 321 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-207ENST00000467273 RELBQ01201 579 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 PDE4DQ08499 809 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 QPCTQ16769 361 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 PARP9Q8IXQ6 854 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-207ENST00000467273 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
PTCD3-207ENST00000467273 ERBINQ96RT1 1412 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 RBM6P78332 1123 aaKnown RBP8.63□□□□□ -1.03
PTCD3-207ENST00000467273 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 HELBQ8NG08 1087 aaPredicted RBP8.63□□□□□ -1.03
PTCD3-207ENST00000467273 SLC26A8Q96RN1 970 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
PTCD3-207ENST00000467273 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 DIP2AQ14689 1571 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 LMTK2Q8IWU2 1503 aa8.63□□□□□ -1.03
PTCD3-207ENST00000467273 ATAD2Q6PL18 1390 aa8.62□□□□□ -1.03
PTCD3-207ENST00000467273 XP32Q5T750 250 aa8.62□□□□□ -1.03
PTCD3-207ENST00000467273 LYPD4Q6UWN0 246 aa8.62□□□□□ -1.03
PTCD3-207ENST00000467273 RGS12O14924 1447 aa8.62□□□□□ -1.03
PTCD3-207ENST00000467273 KANK1Q14678 1352 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 AFF2P51816 1311 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 SLC10A4Q96EP9 437 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 C19orf44Q9H6X5 657 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 LIMD1Q9UGP4 676 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 DCCP43146 1447 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
PTCD3-207ENST00000467273 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.6□□□□□ -1.03
PTCD3-207ENST00000467273 IDI1Q13907 227 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
PTCD3-207ENST00000467273 NOS1P29475 1434 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 EP400Q96L91 3159 aa8.6□□□□□ -1.03
PTCD3-207ENST00000467273 ATF3P18847 181 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
PTCD3-207ENST00000467273 TBX22Q9Y458 520 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 MYOM3Q5VTT5 1437 aa8.59□□□□□ -1.03
PTCD3-207ENST00000467273 MSTNO14793 375 aa8.58□□□□□ -1.04
PTCD3-207ENST00000467273 SRSF11Q05519 484 aaKnown RBP8.58□□□□□ -1.04
PTCD3-207ENST00000467273 DHX9Q08211 1270 aaKnown RBP8.58□□□□□ -1.04
PTCD3-207ENST00000467273 GPKOWQ92917 476 aaPredicted RBP eCLIP8.58□□□□□ -1.042e-6■■■□□ 15.9
PTCD3-207ENST00000467273 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
PTCD3-207ENST00000467273 KIF15Q9NS87 1388 aa8.58□□□□□ -1.04
PTCD3-207ENST00000467273 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
PTCD3-207ENST00000467273 RPRD2Q5VT52 1461 aaKnown RBP8.57□□□□□ -1.04
PTCD3-207ENST00000467273 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
PTCD3-207ENST00000467273 CELA2BP08218 269 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-207ENST00000467273 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
PTCD3-207ENST00000467273 BRINP3Q76B58 766 aa8.57□□□□□ -1.04
PTCD3-207ENST00000467273 ERICH6Q7L0X2 663 aa8.57□□□□□ -1.04
PTCD3-207ENST00000467273 LRRC59Q96AG4 307 aaKnown RBP8.57□□□□□ -1.04
PTCD3-207ENST00000467273 ENAMQ9NRM1 1142 aa8.57□□□□□ -1.04
PTCD3-207ENST00000467273 ASXL1Q8IXJ9 1541 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 LILRB3O75022 631 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 ADAM23O75077 832 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 C14orf37Q86TY3 774 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
PTCD3-207ENST00000467273 GAS6Q14393 721 aa8.55□□□□□ -1.04
PTCD3-207ENST00000467273 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
PTCD3-207ENST00000467273 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
PTCD3-207ENST00000467273 ZBTB33Q86T24 672 aa8.55□□□□□ -1.04
PTCD3-207ENST00000467273 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTCD3-207ENST00000467273 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
PTCD3-207ENST00000467273 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
PTCD3-207ENST00000467273 LRP5O75197 1615 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 PHF20L1A8MW92 1017 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 RAB15P59190 212 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 GALNT6Q8NCL4 622 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 CUEDC1Q9NWM3 386 aaPredicted RBP8.54□□□□□ -1.04
PTCD3-207ENST00000467273 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 TRPM2O94759 1503 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
PTCD3-207ENST00000467273 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
PTCD3-207ENST00000467273 PODNQ7Z5L7 613 aa8.53□□□□□ -1.04
PTCD3-207ENST00000467273 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
PTCD3-207ENST00000467273 LAMC1P11047 1609 aa8.53□□□□□ -1.04
PTCD3-207ENST00000467273 GCC2Q8IWJ2 1684 aa8.53□□□□□ -1.04
PTCD3-207ENST00000467273 PNPLA6Q8IY17 1366 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 PDXDC2PQ6P474 469 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 NEDD1Q8NHV4 660 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 TRPC5Q9UL62 973 aaPredicted RBP8.52□□□□□ -1.05
PTCD3-207ENST00000467273 MST1RQ04912 1400 aa8.52□□□□□ -1.05
PTCD3-207ENST00000467273 PTCH1Q13635 1447 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms