RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
SLF1-203ENST00000466957 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
SLF1-203ENST00000466957 ADH6P28332 368 aa11.47□□□□□ -0.57
SLF1-203ENST00000466957 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
SLF1-203ENST00000466957 EPXP11678 715 aa11.46□□□□□ -0.57
SLF1-203ENST00000466957 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
SLF1-203ENST00000466957 SEC13P55735 322 aa11.46□□□□□ -0.57
SLF1-203ENST00000466957 PHACTR1Q9C0D0 580 aa11.46□□□□□ -0.57
SLF1-203ENST00000466957 EFSO43281 561 aa11.45□□□□□ -0.58
SLF1-203ENST00000466957 DKK1O94907 266 aa11.45□□□□□ -0.58
SLF1-203ENST00000466957 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
SLF1-203ENST00000466957 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
SLF1-203ENST00000466957 DCAF5Q96JK2 942 aa11.45□□□□□ -0.58
SLF1-203ENST00000466957 GPC6Q9Y625 555 aaPredicted RBP11.45□□□□□ -0.58
SLF1-203ENST00000466957 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
SLF1-203ENST00000466957 CRTC2Q53ET0 693 aaPredicted RBP11.44□□□□□ -0.58
SLF1-203ENST00000466957 SCG3Q8WXD2 468 aaKnown RBP11.44□□□□□ -0.58
SLF1-203ENST00000466957 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
SLF1-203ENST00000466957 HINFPQ9BQA5 517 aa11.44□□□□□ -0.58
SLF1-203ENST00000466957 AVENQ9NQS1 362 aaPredicted RBP11.44□□□□□ -0.58
SLF1-203ENST00000466957 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
SLF1-203ENST00000466957 ZNF468Q5VIY5 522 aaPredicted RBP11.43□□□□□ -0.58
SLF1-203ENST00000466957 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
SLF1-203ENST00000466957 FCHSD1Q86WN1 690 aa11.43□□□□□ -0.58
SLF1-203ENST00000466957 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
SLF1-203ENST00000466957 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
SLF1-203ENST00000466957 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L10C9JJH3 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L12C9JPN9 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L21D6R901 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 C21orf2O43822 256 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 LGR5O75473 907 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
SLF1-203ENST00000466957 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 DPYDQ12882 1025 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 NGLY1Q96IV0 654 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 VRTNQ9H8Y1 702 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 KLF15Q9UIH9 416 aa11.42□□□□□ -0.58
SLF1-203ENST00000466957 PTK7Q13308 1070 aa11.41□□□□□ -0.58
SLF1-203ENST00000466957 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
SLF1-203ENST00000466957 CHSY3Q70JA7 882 aa11.41□□□□□ -0.58
SLF1-203ENST00000466957 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
SLF1-203ENST00000466957 ANKIB1Q9P2G1 1089 aa11.41□□□□□ -0.58
SLF1-203ENST00000466957 IGHA1P01876 353 aa11.4□□□□□ -0.58
SLF1-203ENST00000466957 SFSWAPQ12872 951 aaKnown RBP11.4□□□□□ -0.58
SLF1-203ENST00000466957 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
SLF1-203ENST00000466957 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
SLF1-203ENST00000466957 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
SLF1-203ENST00000466957 CEP63Q96MT8 703 aa11.4□□□□□ -0.58
SLF1-203ENST00000466957 PIK3R2O00459 728 aa11.39□□□□□ -0.59
SLF1-203ENST00000466957 SYT9Q86SS6 491 aa11.39□□□□□ -0.59
SLF1-203ENST00000466957 ANKMY2Q8IV38 441 aa11.39□□□□□ -0.59
SLF1-203ENST00000466957 BRD7Q9NPI1 651 aa11.39□□□□□ -0.59
SLF1-203ENST00000466957 FAM196BA6NMK8 535 aa11.38□□□□□ -0.59
SLF1-203ENST00000466957 HOXB4P17483 251 aaPredicted RBP11.38□□□□□ -0.59
SLF1-203ENST00000466957 POTEAQ6S8J7 498 aa11.38□□□□□ -0.59
SLF1-203ENST00000466957 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
SLF1-203ENST00000466957 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
SLF1-203ENST00000466957 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
SLF1-203ENST00000466957 GNB5O14775 395 aa11.37□□□□□ -0.59
SLF1-203ENST00000466957 DGKGP49619 791 aa11.37□□□□□ -0.59
SLF1-203ENST00000466957 LINC00114Q6XXX2 140 aa11.37□□□□□ -0.59
SLF1-203ENST00000466957 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
SLF1-203ENST00000466957 SUV39H2Q9H5I1 410 aa11.37□□□□□ -0.59
SLF1-203ENST00000466957 RAB44Q7Z6P3 723 aaPredicted RBP11.36□□□□□ -0.59
SLF1-203ENST00000466957 STAG2Q8N3U4 1231 aa11.36□□□□□ -0.59
SLF1-203ENST00000466957 SLC30A3Q99726 388 aa11.36□□□□□ -0.59
SLF1-203ENST00000466957 MSTNO14793 375 aa11.35□□□□□ -0.59
SLF1-203ENST00000466957 COL8A1P27658 744 aa11.35□□□□□ -0.59
SLF1-203ENST00000466957 SPEM2Q0P670 501 aa11.35□□□□□ -0.59
SLF1-203ENST00000466957 ALAS2P22557 587 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 TYRO3Q06418 890 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 HIF1AQ16665 826 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
SLF1-203ENST00000466957 ELOA3CA0A087WX78 387 aaPredicted RBP11.33□□□□□ -0.6
SLF1-203ENST00000466957 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
SLF1-203ENST00000466957 RFX1P22670 979 aa11.33□□□□□ -0.6
SLF1-203ENST00000466957 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
SLF1-203ENST00000466957 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
SLF1-203ENST00000466957 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
SLF1-203ENST00000466957 IGFBP4P22692 258 aa11.32□□□□□ -0.6
SLF1-203ENST00000466957 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
SLF1-203ENST00000466957 NOP53Q9NZM5 478 aaKnown RBP11.32□□□□□ -0.6
SLF1-203ENST00000466957 KRBA1A5PL33 1030 aa11.31□□□□□ -0.6
SLF1-203ENST00000466957 SIN3BO75182 1162 aa11.31□□□□□ -0.6
SLF1-203ENST00000466957 ITGB2P05107 769 aa11.31□□□□□ -0.6
SLF1-203ENST00000466957 BTLAQ7Z6A9 289 aa11.31□□□□□ -0.6
SLF1-203ENST00000466957 SPOCK3Q9BQ16 436 aa11.31□□□□□ -0.6
SLF1-203ENST00000466957 SUZ12Q15022 739 aaKnown RBP11.3□□□□□ -0.6
SLF1-203ENST00000466957 RTN1Q16799 776 aa11.3□□□□□ -0.6
SLF1-203ENST00000466957 ARXQ96QS3 562 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms