RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 BCL9O00512 1426 aa8.76□□□□□ -1.01
SEC22A-202ENST00000466519 NRKQ7Z2Y5 1582 aa8.76□□□□□ -1.01
SEC22A-202ENST00000466519 PHRF1Q9P1Y6 1649 aaKnown RBP8.76□□□□□ -1.01
SEC22A-202ENST00000466519 LMO7Q8WWI1 1683 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 HOXA2O43364 376 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 TLL1O43897 1013 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 RGS20O76081 388 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 ADH1BP00325 375 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 SCUBE3Q8IX30 993 aa8.75□□□□□ -1.01
SEC22A-202ENST00000466519 CENPJQ9HC77 1338 aaPredicted RBP8.75□□□□□ -1.01
SEC22A-202ENST00000466519 MS4A1P11836 297 aa8.74□□□□□ -1.01
SEC22A-202ENST00000466519 GPR162Q16538 588 aa8.74□□□□□ -1.01
SEC22A-202ENST00000466519 Q3C1V9 767 aa8.74□□□□□ -1.01
SEC22A-202ENST00000466519 KCNH5Q8NCM2 988 aa8.74□□□□□ -1.01
SEC22A-202ENST00000466519 BEGAINQ9BUH8 593 aa8.74□□□□□ -1.01
SEC22A-202ENST00000466519 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
SEC22A-202ENST00000466519 UTRNP46939 3433 aa8.73□□□□□ -1.01
SEC22A-202ENST00000466519 USP6P35125 1406 aa8.73□□□□□ -1.01
SEC22A-202ENST00000466519 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
SEC22A-202ENST00000466519 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
SEC22A-202ENST00000466519 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
SEC22A-202ENST00000466519 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
SEC22A-202ENST00000466519 SPSB2Q99619 263 aa8.72□□□□□ -1.01
SEC22A-202ENST00000466519 TTC21BQ7Z4L5 1316 aa8.72□□□□□ -1.01
SEC22A-202ENST00000466519 CPSF1Q10570 1443 aaKnown RBP8.71□□□□□ -1.01
SEC22A-202ENST00000466519 PEAK1Q9H792 1746 aa8.71□□□□□ -1.01
SEC22A-202ENST00000466519 PARP4Q9UKK3 1724 aaKnown RBP8.71□□□□□ -1.01
SEC22A-202ENST00000466519 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
SEC22A-202ENST00000466519 ZNF827Q17R98 1081 aa8.71□□□□□ -1.02
SEC22A-202ENST00000466519 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
SEC22A-202ENST00000466519 CCDC7Q96M83 1385 aa8.71□□□□□ -1.02
SEC22A-202ENST00000466519 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
SEC22A-202ENST00000466519 SLIT3O75094 1523 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
SEC22A-202ENST00000466519 ITSN1Q15811 1721 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 IL2RBP14784 551 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 POLD1P28340 1107 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 SLC16A10Q8TF71 515 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 SLC6A16Q9GZN6 736 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 TTC21AQ8NDW8 1320 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 MYOM1P52179 1685 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 TOPAZ1Q8N9V7 1692 aa8.69□□□□□ -1.02
SEC22A-202ENST00000466519 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
SEC22A-202ENST00000466519 GJA5P36382 358 aa8.68□□□□□ -1.02
SEC22A-202ENST00000466519 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
SEC22A-202ENST00000466519 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
SEC22A-202ENST00000466519 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
SEC22A-202ENST00000466519 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
SEC22A-202ENST00000466519 S1PR4O95977 384 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 FDX1P10109 184 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 TNS2Q63HR2 1409 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 RNF19BQ6ZMZ0 732 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 HLA-CQ95604 372 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
SEC22A-202ENST00000466519 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
SEC22A-202ENST00000466519 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 PNPLA7Q6ZV29 1317 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 KCNQ4P56696 695 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
SEC22A-202ENST00000466519 NLGN2Q8NFZ4 835 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
SEC22A-202ENST00000466519 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
SEC22A-202ENST00000466519 GPBP1L1Q9HC44 474 aaPredicted RBP8.66□□□□□ -1.02
SEC22A-202ENST00000466519 KTN1Q86UP2 1357 aaKnown RBP8.65□□□□□ -1.02
SEC22A-202ENST00000466519 MOXD2PA6NHM9 499 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 ANKLE1Q8NAG6 615 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
SEC22A-202ENST00000466519 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
SEC22A-202ENST00000466519 YBX3P16989 372 aaKnown RBP eCLIP8.64□□□□□ -1.03
SEC22A-202ENST00000466519 RSBN1LQ6PCB5 846 aaPredicted RBP8.64□□□□□ -1.03
SEC22A-202ENST00000466519 NME9Q86XW9 330 aa8.64□□□□□ -1.03
SEC22A-202ENST00000466519 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
SEC22A-202ENST00000466519 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
SEC22A-202ENST00000466519 COL18A1P39060 1754 aa8.63□□□□□ -1.03
SEC22A-202ENST00000466519 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
SEC22A-202ENST00000466519 NEUROD2Q15784 382 aa8.63□□□□□ -1.03
SEC22A-202ENST00000466519 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
SEC22A-202ENST00000466519 SPDYE5A6NIY4 337 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 SPTLC1O15269 473 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 NDUFV2P19404 249 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 MYSM1Q5VVJ2 828 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 FAM160A2Q8N612 972 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-202ENST00000466519 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 V9GY48 417 aaPredicted RBP8.62□□□□□ -1.03
SEC22A-202ENST00000466519 NFAT5O94916 1531 aa8.62□□□□□ -1.03
SEC22A-202ENST00000466519 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms