RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SKIV2LQ15477 1246 aaKnown RBP9.23□□□□□ -0.93
NCL-208ENST00000466274 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
NCL-208ENST00000466274 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
NCL-208ENST00000466274 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
NCL-208ENST00000466274 KIF15Q9NS87 1388 aa9.23□□□□□ -0.93
NCL-208ENST00000466274 NOS1P29475 1434 aa9.22□□□□□ -0.93
NCL-208ENST00000466274 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
NCL-208ENST00000466274 C1QTNF8P60827 252 aa9.22□□□□□ -0.93
NCL-208ENST00000466274 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
NCL-208ENST00000466274 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
NCL-208ENST00000466274 UNC13BO14795 1591 aa9.21□□□□□ -0.93
NCL-208ENST00000466274 MAN1A2O60476 641 aa9.21□□□□□ -0.94
NCL-208ENST00000466274 BMP2P12643 396 aa9.21□□□□□ -0.94
NCL-208ENST00000466274 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
NCL-208ENST00000466274 ADAMTS13Q76LX8 1427 aa9.21□□□□□ -0.94
NCL-208ENST00000466274 NR6A1Q15406 480 aa9.2□□□□□ -0.94
NCL-208ENST00000466274 SH3D19Q5HYK7 790 aa9.2□□□□□ -0.94
NCL-208ENST00000466274 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
NCL-208ENST00000466274 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
NCL-208ENST00000466274 ZNF784Q8NCA9 323 aaPredicted RBP9.2□□□□□ -0.94
NCL-208ENST00000466274 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.94
NCL-208ENST00000466274 FKBPLQ9UIM3 349 aa9.2□□□□□ -0.94
NCL-208ENST00000466274 CHD2O14647 1828 aaKnown RBP9.19□□□□□ -0.94
NCL-208ENST00000466274 UPP2O95045 317 aa9.19□□□□□ -0.94
NCL-208ENST00000466274 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
NCL-208ENST00000466274 CCDC116Q8IYX3 515 aa9.19□□□□□ -0.94
NCL-208ENST00000466274 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.19□□□□□ -0.94
NCL-208ENST00000466274 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
NCL-208ENST00000466274 RALGAPBQ86X10 1494 aa9.19□□□□□ -0.94
NCL-208ENST00000466274 LMTK2Q8IWU2 1503 aa9.19□□□□□ -0.94
NCL-208ENST00000466274 CEP152O94986 1710 aa9.19□□□□□ -0.94
NCL-208ENST00000466274 TRPM2O94759 1503 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 C1orf167Q5SNV9 1468 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 MYOM3Q5VTT5 1437 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 PDXDC2PQ6P474 469 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 NPHP3Q7Z494 1330 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 ARHGAP9Q9BRR9 750 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
NCL-208ENST00000466274 ADGRL3Q9HAR2 1447 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 NINLQ9Y2I6 1382 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 AP1G2O75843 785 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 VPS72Q15906 364 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 NBPF8Q3BBV2 869 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 SPON1Q9HCB6 807 aa9.17□□□□□ -0.94
NCL-208ENST00000466274 MYOM2P54296 1465 aa9.16□□□□□ -0.94
NCL-208ENST00000466274 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
NCL-208ENST00000466274 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
NCL-208ENST00000466274 ZSCAN1Q8NBB4 408 aa9.16□□□□□ -0.94
NCL-208ENST00000466274 ORAI2Q96SN7 254 aa9.16□□□□□ -0.94
NCL-208ENST00000466274 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.94
NCL-208ENST00000466274 LRPPRCP42704 1394 aaKnown RBP9.15□□□□□ -0.94
NCL-208ENST00000466274 CBLBQ13191 982 aa9.15□□□□□ -0.94
NCL-208ENST00000466274 ZBTB33Q86T24 672 aa9.15□□□□□ -0.94
NCL-208ENST00000466274 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
NCL-208ENST00000466274 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
NCL-208ENST00000466274 OCSTAMPQ9BR26 566 aa9.15□□□□□ -0.94
NCL-208ENST00000466274 TSEN34Q9BSV6 310 aaKnown RBP9.15□□□□□ -0.94
NCL-208ENST00000466274 DNMT3LQ9UJW3 386 aa9.15□□□□□ -0.94
NCL-208ENST00000466274 PPFIA3O75145 1194 aa9.14□□□□□ -0.95
NCL-208ENST00000466274 ESCO1Q5FWF5 840 aa9.13□□□□□ -0.95
NCL-208ENST00000466274 SLC10A4Q96EP9 437 aa9.13□□□□□ -0.95
NCL-208ENST00000466274 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 SLIT2O94813 1529 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 KCNQ2O43526 872 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 VSIG8P0DPA2 414 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 EZH2Q15910 746 aaKnown RBP9.12□□□□□ -0.95
NCL-208ENST00000466274 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 DISP2A7MBM2 1401 aa9.12□□□□□ -0.95
NCL-208ENST00000466274 SPHKAPQ2M3C7 1700 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 FIGNL2A6NMB9 653 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 TTLL8A6PVC2 850 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 PTK2Q05397 1052 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 Q6ZVU0 165 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 CAMKK2Q96RR4 588 aa9.11□□□□□ -0.95
NCL-208ENST00000466274 HMX1Q9NP08 348 aaPredicted RBP9.11□□□□□ -0.95
NCL-208ENST00000466274 ZC3H4Q9UPT8 1303 aaKnown RBP9.1□□□□□ -0.95
NCL-208ENST00000466274 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
NCL-208ENST00000466274 FOXO3O43524 673 aa9.1□□□□□ -0.95
NCL-208ENST00000466274 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
NCL-208ENST00000466274 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
NCL-208ENST00000466274 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
NCL-208ENST00000466274 METP08581 1390 aa9.1□□□□□ -0.95
NCL-208ENST00000466274 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
NCL-208ENST00000466274 GLI3P10071 1580 aa9.09□□□□□ -0.95
NCL-208ENST00000466274 APBA3O96018 575 aa9.09□□□□□ -0.95
NCL-208ENST00000466274 INTS6LQ5JSJ4 861 aaKnown RBP9.09□□□□□ -0.95
NCL-208ENST00000466274 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
NCL-208ENST00000466274 ABCC5O15440 1437 aa9.08□□□□□ -0.96
NCL-208ENST00000466274 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
NCL-208ENST00000466274 XPCQ01831 940 aaPredicted RBP9.08□□□□□ -0.96
NCL-208ENST00000466274 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.08□□□□□ -0.969e-17■■■■■ 33.8
NCL-208ENST00000466274 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
NCL-208ENST00000466274 FAM196AQ6ZSG2 479 aa9.08□□□□□ -0.96
NCL-208ENST00000466274 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
NCL-208ENST00000466274 TMEM131LA2VDJ0 1609 aa9.08□□□□□ -0.96
NCL-208ENST00000466274 LAMC1P11047 1609 aa9.07□□□□□ -0.96
NCL-208ENST00000466274 SPINT1O43278 529 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms