RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
CD40-204ENST00000466205 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
CD40-204ENST00000466205 KIF6Q6ZMV9 814 aa13.26□□□□□ -0.29
CD40-204ENST00000466205 NRXN2Q9P2S2 1712 aa13.26□□□□□ -0.29
CD40-204ENST00000466205 NIP7Q9Y221 180 aaKnown RBP eCLIP13.26□□□□□ -0.29
CD40-204ENST00000466205 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
CD40-204ENST00000466205 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
CD40-204ENST00000466205 GPTP24298 496 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 PDIA6Q15084 440 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 C2CD5Q86YS7 1000 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
CD40-204ENST00000466205 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
CD40-204ENST00000466205 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
CD40-204ENST00000466205 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
CD40-204ENST00000466205 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
CD40-204ENST00000466205 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
CD40-204ENST00000466205 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
CD40-204ENST00000466205 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
CD40-204ENST00000466205 GNAI1P63096 354 aa13.23□□□□□ -0.29
CD40-204ENST00000466205 ST5P78524 1137 aa13.23□□□□□ -0.29
CD40-204ENST00000466205 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
CD40-204ENST00000466205 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
CD40-204ENST00000466205 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
CD40-204ENST00000466205 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
CD40-204ENST00000466205 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
CD40-204ENST00000466205 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
CD40-204ENST00000466205 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
CD40-204ENST00000466205 CLEC4GQ6UXB4 293 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 ANKRD31Q8N7Z5 1873 aa13.22□□□□□ -0.29
CD40-204ENST00000466205 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.29
CD40-204ENST00000466205 H0YIN7 160 aa13.21□□□□□ -0.29
CD40-204ENST00000466205 TCERG1O14776 1098 aaKnown RBP13.21□□□□□ -0.29
CD40-204ENST00000466205 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
CD40-204ENST00000466205 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
CD40-204ENST00000466205 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
CD40-204ENST00000466205 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.29
CD40-204ENST00000466205 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.3
CD40-204ENST00000466205 CHD4Q14839 1912 aa13.21□□□□□ -0.3
CD40-204ENST00000466205 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
CD40-204ENST00000466205 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
CD40-204ENST00000466205 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
CD40-204ENST00000466205 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
CD40-204ENST00000466205 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
CD40-204ENST00000466205 NUP98P52948 1817 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 PDE6BP35913 854 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
CD40-204ENST00000466205 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
CD40-204ENST00000466205 RASSF7Q02833 373 aa13.18□□□□□ -0.3
CD40-204ENST00000466205 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
CD40-204ENST00000466205 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
CD40-204ENST00000466205 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
CD40-204ENST00000466205 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
CD40-204ENST00000466205 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
CD40-204ENST00000466205 HOXB7P09629 217 aa13.17□□□□□ -0.3
CD40-204ENST00000466205 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
CD40-204ENST00000466205 TTLL6Q8N841 843 aa13.17□□□□□ -0.3
CD40-204ENST00000466205 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
CD40-204ENST00000466205 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
CD40-204ENST00000466205 C21orf2O43822 256 aa13.16□□□□□ -0.3
CD40-204ENST00000466205 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
CD40-204ENST00000466205 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
CD40-204ENST00000466205 ARFGEF1Q9Y6D6 1849 aa13.16□□□□□ -0.3
CD40-204ENST00000466205 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 RGL2O15211 777 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 NTSR2O95665 410 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 SRGNP10124 158 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
CD40-204ENST00000466205 MASTLQ96GX5 879 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
CD40-204ENST00000466205 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
CD40-204ENST00000466205 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
CD40-204ENST00000466205 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 PPP1R42Q7Z4L9 355 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 PLBD2Q8NHP8 589 aa13.14□□□□□ -0.31
CD40-204ENST00000466205 UTP14AQ9BVJ6 771 aaKnown RBP13.14□□□□□ -0.31
CD40-204ENST00000466205 IL16Q14005 1332 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
CD40-204ENST00000466205 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
CD40-204ENST00000466205 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 OLFM4Q6UX06 510 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
CD40-204ENST00000466205 NLRP10Q86W26 655 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms