RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ALBP02768 609 aa9.22□□□□□ -0.93
LRCH3-211ENST00000466054 ADH7P40394 386 aa9.22□□□□□ -0.93
LRCH3-211ENST00000466054 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
LRCH3-211ENST00000466054 MICALL1Q8N3F8 863 aa9.22□□□□□ -0.93
LRCH3-211ENST00000466054 RAC1P63000 192 aa9.21□□□□□ -0.94
LRCH3-211ENST00000466054 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.94
LRCH3-211ENST00000466054 BACH1O14867 736 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 HYAL3O43820 417 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-211ENST00000466054 NRG1Q02297 640 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-211ENST00000466054 MTFR1Q15390 333 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 TXNRD3Q86VQ6 643 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 PLPP7Q8NBV4 271 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 TP53INP1Q96A56 240 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 IQSEC3Q9UPP2 1182 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-211ENST00000466054 TBC1D2BQ9UPU7 963 aa9.2□□□□□ -0.94
LRCH3-211ENST00000466054 LILRB5O75023 590 aa9.19□□□□□ -0.94
LRCH3-211ENST00000466054 MBTPS1Q14703 1052 aa9.19□□□□□ -0.94
LRCH3-211ENST00000466054 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
LRCH3-211ENST00000466054 GOLGA2P5Q9HBQ8 144 aa9.19□□□□□ -0.94
LRCH3-211ENST00000466054 NID1P14543 1247 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 ELNP15502 786 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 TXLNAP40222 546 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 ZNF295-AS1Q8N0V1 137 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 MDFIQ99750 246 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 USP21Q9UK80 565 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
LRCH3-211ENST00000466054 TMEM229AB2RXF0 380 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 PSME1Q06323 249 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 TBC1D8BQ0IIM8 1120 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 COL9A3Q14050 684 aaPredicted RBP9.17□□□□□ -0.94
LRCH3-211ENST00000466054 ADGRE1Q14246 886 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 L3MBTL2Q969R5 705 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
LRCH3-211ENST00000466054 SFSWAPQ12872 951 aaKnown RBP9.16□□□□□ -0.94
LRCH3-211ENST00000466054 RAB44Q7Z6P3 723 aaPredicted RBP9.16□□□□□ -0.94
LRCH3-211ENST00000466054 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
LRCH3-211ENST00000466054 RHPN1Q8TCX5 695 aa9.15□□□□□ -0.94
LRCH3-211ENST00000466054 GPC6Q9Y625 555 aaPredicted RBP9.15□□□□□ -0.94
LRCH3-211ENST00000466054 A0A0A0MRY4 1105 aa9.14□□□□□ -0.95
LRCH3-211ENST00000466054 SELPP16109 830 aa9.14□□□□□ -0.95
LRCH3-211ENST00000466054 SEMA3FQ13275 785 aa9.14□□□□□ -0.95
LRCH3-211ENST00000466054 NOS2P35228 1153 aa9.13□□□□□ -0.95
LRCH3-211ENST00000466054 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-211ENST00000466054 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
LRCH3-211ENST00000466054 IGFLR1Q9H665 355 aa9.13□□□□□ -0.95
LRCH3-211ENST00000466054 JPH1Q9HDC5 661 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-211ENST00000466054 TEAD4Q15561 434 aa9.12□□□□□ -0.95
LRCH3-211ENST00000466054 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
LRCH3-211ENST00000466054 BRD7Q9NPI1 651 aa9.12□□□□□ -0.95
LRCH3-211ENST00000466054 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-211ENST00000466054 EML3Q32P44 896 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 SHISA2Q6UWI4 295 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 BHMTQ93088 406 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 ANKIB1Q9P2G1 1089 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
LRCH3-211ENST00000466054 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 EML1O00423 815 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 IRF5Q13568 498 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 NOD1Q9Y239 953 aa9.1□□□□□ -0.95
LRCH3-211ENST00000466054 PAX4O43316 350 aa9.09□□□□□ -0.95
LRCH3-211ENST00000466054 MCTP1Q6DN14 999 aa9.09□□□□□ -0.95
LRCH3-211ENST00000466054 SLC9A9Q8IVB4 645 aa9.09□□□□□ -0.95
LRCH3-211ENST00000466054 NUDT8Q8WV74 236 aa9.09□□□□□ -0.95
LRCH3-211ENST00000466054 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
LRCH3-211ENST00000466054 ABL2P42684 1182 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 GTF2IP78347 998 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 WASHC4Q2M389 1173 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 KRTAP9-9Q9BYP9 154 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 KRTAP9-4Q9BYQ2 154 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
LRCH3-211ENST00000466054 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
LRCH3-211ENST00000466054 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
LRCH3-211ENST00000466054 COBLO75128 1261 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 SOX11P35716 441 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 KRTAP19-1Q8IUB9 90 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 PCMTD2Q9NV79 361 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 RNF112Q9ULX5 631 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 SLC6A14Q9UN76 642 aa9.06□□□□□ -0.96
LRCH3-211ENST00000466054 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
LRCH3-211ENST00000466054 TXKP42681 527 aa9.05□□□□□ -0.96
LRCH3-211ENST00000466054 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-211ENST00000466054 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
LRCH3-211ENST00000466054 HSH2DQ96JZ2 352 aa9.05□□□□□ -0.96
LRCH3-211ENST00000466054 RGS9O75916 674 aaPredicted RBP9.04□□□□□ -0.96
LRCH3-211ENST00000466054 PNMA5Q96PV4 448 aa9.04□□□□□ -0.96
LRCH3-211ENST00000466054 SKIP12755 728 aa9.03□□□□□ -0.96
LRCH3-211ENST00000466054 PSAPL1Q6NUJ1 521 aa9.03□□□□□ -0.96
LRCH3-211ENST00000466054 TNS4Q8IZW8 715 aa9.03□□□□□ -0.96
LRCH3-211ENST00000466054 GDPD2Q9HCC8 539 aa9.03□□□□□ -0.96
LRCH3-211ENST00000466054 KCNQ4P56696 695 aa9.02□□□□□ -0.97
LRCH3-211ENST00000466054 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
LRCH3-211ENST00000466054 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms