RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 TBC1D9BQ66K14 1250 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
THBS3-205ENST00000465596 PPP1R1BQ9UD71 204 aaPredicted RBP10.07□□□□□ -0.8
THBS3-205ENST00000465596 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 LRRC37AA6NMS7 1700 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 FANCIQ9NVI1 1328 aa10.07□□□□□ -0.8
THBS3-205ENST00000465596 A0A1B0GUL6 1792 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 COL4A1P02462 1669 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 A0A087WZG4 1122 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 ANXA1P04083 346 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 HLFQ16534 295 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
THBS3-205ENST00000465596 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 TSPYL6Q8N831 410 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 RIC1Q4ADV7 1423 aa10.06□□□□□ -0.8
THBS3-205ENST00000465596 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 ZPR1O75312 459 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 KCNA3P22001 575 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
THBS3-205ENST00000465596 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
THBS3-205ENST00000465596 CHPF2Q9P2E5 772 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
THBS3-205ENST00000465596 MAP3K15Q6ZN16 1313 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 UBN2Q6ZU65 1347 aa10.05□□□□□ -0.8
THBS3-205ENST00000465596 LTBP1Q14766 1721 aa10.04□□□□□ -0.8
THBS3-205ENST00000465596 IBTKQ9P2D0 1353 aaPredicted RBP10.04□□□□□ -0.8
THBS3-205ENST00000465596 YBX3P16989 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
THBS3-205ENST00000465596 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
THBS3-205ENST00000465596 ABCC12Q96J65 1359 aa10.03□□□□□ -0.8
THBS3-205ENST00000465596 ERVV-1B6SEH8 477 aa10.03□□□□□ -0.8
THBS3-205ENST00000465596 MYL6BP14649 208 aa10.03□□□□□ -0.8
THBS3-205ENST00000465596 SNED1Q8TER0 1413 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 SERPINB2P05120 415 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 EIF2S2P20042 333 aaKnown RBP10.02□□□□□ -0.81
THBS3-205ENST00000465596 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 PRR5LQ6MZQ0 368 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 ZNF34Q8IZ26 560 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 TRMT2AQ8IZ69 625 aaKnown RBP10.02□□□□□ -0.81
THBS3-205ENST00000465596 NECTIN2Q92692 538 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
THBS3-205ENST00000465596 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
THBS3-205ENST00000465596 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
THBS3-205ENST00000465596 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
THBS3-205ENST00000465596 DBF4Q9UBU7 674 aaPredicted RBP10.01□□□□□ -0.81
THBS3-205ENST00000465596 SALL2Q9Y467 1007 aaPredicted RBP10.01□□□□□ -0.81
THBS3-205ENST00000465596 ADCY9O60503 1353 aa10.01□□□□□ -0.81
THBS3-205ENST00000465596 KLRG2A4D1S0 409 aaPredicted RBP10□□□□□ -0.81
THBS3-205ENST00000465596 ELL2O00472 640 aaPredicted RBP10□□□□□ -0.81
THBS3-205ENST00000465596 VAMP4O75379 141 aa10□□□□□ -0.81
THBS3-205ENST00000465596 NTSR2O95665 410 aa10□□□□□ -0.81
THBS3-205ENST00000465596 DPEP1P16444 411 aa10□□□□□ -0.81
THBS3-205ENST00000465596 TGFB2P61812 414 aa10□□□□□ -0.81
THBS3-205ENST00000465596 COPS6Q7L5N1 327 aa10□□□□□ -0.81
THBS3-205ENST00000465596 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
THBS3-205ENST00000465596 PHAXQ9H814 394 aaKnown RBP10□□□□□ -0.81
THBS3-205ENST00000465596 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
THBS3-205ENST00000465596 EXOSC9Q06265 439 aaKnown RBP9.99□□□□□ -0.81
THBS3-205ENST00000465596 SLFN5Q08AF3 891 aa9.99□□□□□ -0.81
THBS3-205ENST00000465596 TWISTNBQ3B726 338 aaPredicted RBP9.99□□□□□ -0.81
THBS3-205ENST00000465596 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
THBS3-205ENST00000465596 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
THBS3-205ENST00000465596 A0A0G2JLW4 131 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 CHRNA5P30532 468 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 KIF6Q6ZMV9 814 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 G2E3Q7L622 706 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 KLHL34Q8N239 644 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 PLBD2Q8NHP8 589 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 CDCA7LQ96GN5 454 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 SETDB2Q96T68 719 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 ISCA1Q9BUE6 129 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
THBS3-205ENST00000465596 PSME4Q14997 1843 aa9.98□□□□□ -0.81
THBS3-205ENST00000465596 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 CRY2Q49AN0 593 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 SUSD4Q5VX71 490 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 BRIP1Q9BX63 1249 aa9.97□□□□□ -0.81
THBS3-205ENST00000465596 GPTP24298 496 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 GOLGA2Q08379 1002 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 TRIM28Q13263 835 aaKnown RBP9.96□□□□□ -0.82
THBS3-205ENST00000465596 TCIRG1Q13488 830 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 CCDC30Q5VVM6 783 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 C3orf67Q6ZVT6 689 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
THBS3-205ENST00000465596 E9PSI1 815 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 SRGNP10124 158 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
THBS3-205ENST00000465596 ERFEQ4G0M1 354 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 ANKRD13DQ6ZTN6 518 aa9.95□□□□□ -0.82
THBS3-205ENST00000465596 NBPF5PQ86XG9 351 aaPredicted RBP9.95□□□□□ -0.82
THBS3-205ENST00000465596 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms