RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
CUEDC2-202ENST00000465409 GIGYF2Q6Y7W6 1299 aaKnown RBP16.93■□□□□ 0.3
CUEDC2-202ENST00000465409 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
CUEDC2-202ENST00000465409 CARMIL3Q8ND23 1372 aa16.92■□□□□ 0.3
CUEDC2-202ENST00000465409 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
CUEDC2-202ENST00000465409 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
CUEDC2-202ENST00000465409 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
CUEDC2-202ENST00000465409 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
CUEDC2-202ENST00000465409 SCN7AQ01118 1682 aa16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 VAMP4O75379 141 aa16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 TPTE2Q6XPS3 522 aa16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
CUEDC2-202ENST00000465409 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 SLFN5Q08AF3 891 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 HLFQ16534 295 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 PROSER3Q2NL68 480 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 TSPYL6Q8N831 410 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
CUEDC2-202ENST00000465409 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
CUEDC2-202ENST00000465409 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 PARP10Q53GL7 1025 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 ZNF34Q8IZ26 560 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 NYXQ9GZU5 481 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.29
CUEDC2-202ENST00000465409 NRXN2Q9P2S2 1712 aa16.88■□□□□ 0.29
CUEDC2-202ENST00000465409 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
CUEDC2-202ENST00000465409 IBTKQ9P2D0 1353 aaPredicted RBP16.88■□□□□ 0.29
CUEDC2-202ENST00000465409 ANXA1P04083 346 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 PDE6BP35913 854 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 BICDL1Q6ZP65 573 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
CUEDC2-202ENST00000465409 ST5P78524 1137 aa16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 NBPF5PQ86XG9 351 aaPredicted RBP16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
CUEDC2-202ENST00000465409 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
CUEDC2-202ENST00000465409 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CUEDC2-202ENST00000465409 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
CUEDC2-202ENST00000465409 H0YIN7 160 aa16.84■□□□□ 0.29
CUEDC2-202ENST00000465409 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
CUEDC2-202ENST00000465409 NUP98P52948 1817 aa16.84■□□□□ 0.29
CUEDC2-202ENST00000465409 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
CUEDC2-202ENST00000465409 NPHP1O15259 732 aa16.83■□□□□ 0.28
CUEDC2-202ENST00000465409 KCNA3P22001 575 aa16.83■□□□□ 0.28
CUEDC2-202ENST00000465409 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
CUEDC2-202ENST00000465409 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
CUEDC2-202ENST00000465409 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 DPEP1P16444 411 aa16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 GTF2E1P29083 439 aaPredicted RBP16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 GPR162Q16538 588 aa16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 ISCA1Q9BUE6 129 aa16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
CUEDC2-202ENST00000465409 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
CUEDC2-202ENST00000465409 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
CUEDC2-202ENST00000465409 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
CUEDC2-202ENST00000465409 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
CUEDC2-202ENST00000465409 UTP14AQ9BVJ6 771 aaKnown RBP16.81■□□□□ 0.28
CUEDC2-202ENST00000465409 UBN2Q6ZU65 1347 aa16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 HSP90B1P14625 803 aaKnown RBP16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 SUSD4Q5VX71 490 aa16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
CUEDC2-202ENST00000465409 GPTP24298 496 aa16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 FLIIQ13045 1269 aa16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 STYK1Q6J9G0 422 aa16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 C2CD5Q86YS7 1000 aa16.79■□□□□ 0.28
CUEDC2-202ENST00000465409 ZBED9Q6R2W3 1325 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 NTSR2O95665 410 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 SRGNP10124 158 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
CUEDC2-202ENST00000465409 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
CUEDC2-202ENST00000465409 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
CUEDC2-202ENST00000465409 BRPF1P55201 1214 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms