RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
SNX17-205ENST00000464279 PRR5LQ6MZQ0 368 aa17.34■□□□□ 0.37
SNX17-205ENST00000464279 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
SNX17-205ENST00000464279 GPC2Q8N158 579 aa17.34■□□□□ 0.37
SNX17-205ENST00000464279 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
SNX17-205ENST00000464279 SLX4Q8IY92 1834 aa17.33■□□□□ 0.37
SNX17-205ENST00000464279 TRAF5O00463 557 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNX17-205ENST00000464279 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 ZBTB1Q9Y2K1 713 aa17.33■□□□□ 0.36
SNX17-205ENST00000464279 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
SNX17-205ENST00000464279 CYP19A1P11511 503 aaPredicted RBP17.32■□□□□ 0.36
SNX17-205ENST00000464279 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
SNX17-205ENST00000464279 MTHFSP49914 203 aa17.32■□□□□ 0.36
SNX17-205ENST00000464279 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
SNX17-205ENST00000464279 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
SNX17-205ENST00000464279 FZD9O00144 591 aa17.31■□□□□ 0.36
SNX17-205ENST00000464279 SRGNP10124 158 aa17.31■□□□□ 0.36
SNX17-205ENST00000464279 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
SNX17-205ENST00000464279 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
SNX17-205ENST00000464279 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
SNX17-205ENST00000464279 NPHP1O15259 732 aa17.29■□□□□ 0.36
SNX17-205ENST00000464279 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
SNX17-205ENST00000464279 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
SNX17-205ENST00000464279 TESK2Q96S53 571 aa17.29■□□□□ 0.36
SNX17-205ENST00000464279 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
SNX17-205ENST00000464279 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
SNX17-205ENST00000464279 NOGQ13253 232 aa17.28■□□□□ 0.36
SNX17-205ENST00000464279 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
SNX17-205ENST00000464279 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
SNX17-205ENST00000464279 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
SNX17-205ENST00000464279 ST5P78524 1137 aa17.27■□□□□ 0.36
SNX17-205ENST00000464279 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
SNX17-205ENST00000464279 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
SNX17-205ENST00000464279 A0A087WZG4 1122 aa17.26■□□□□ 0.35
SNX17-205ENST00000464279 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
SNX17-205ENST00000464279 RTKN2Q8IZC4 609 aa17.26■□□□□ 0.35
SNX17-205ENST00000464279 SAGE1Q9NXZ1 904 aa17.26■□□□□ 0.35
SNX17-205ENST00000464279 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
SNX17-205ENST00000464279 EPS15P42566 896 aa17.25■□□□□ 0.35
SNX17-205ENST00000464279 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
SNX17-205ENST00000464279 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
SNX17-205ENST00000464279 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
SNX17-205ENST00000464279 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
SNX17-205ENST00000464279 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
SNX17-205ENST00000464279 SCNN1DP51172 638 aa17.24■□□□□ 0.35
SNX17-205ENST00000464279 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
SNX17-205ENST00000464279 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
SNX17-205ENST00000464279 ZIC5Q96T25 663 aa17.23■□□□□ 0.35
SNX17-205ENST00000464279 HPS5Q9UPZ3 1129 aa17.23■□□□□ 0.35
SNX17-205ENST00000464279 FXR1P51114 621 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX17-205ENST00000464279 EIF5P55010 431 aaKnown RBP17.22■□□□□ 0.35
SNX17-205ENST00000464279 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
SNX17-205ENST00000464279 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
SNX17-205ENST00000464279 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
SNX17-205ENST00000464279 NPR1P16066 1061 aa17.21■□□□□ 0.35
SNX17-205ENST00000464279 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
SNX17-205ENST00000464279 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
SNX17-205ENST00000464279 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
SNX17-205ENST00000464279 DLL1O00548 723 aa17.19■□□□□ 0.34
SNX17-205ENST00000464279 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
SNX17-205ENST00000464279 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
SNX17-205ENST00000464279 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
SNX17-205ENST00000464279 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
SNX17-205ENST00000464279 PSMD1Q99460 953 aa17.18■□□□□ 0.34
SNX17-205ENST00000464279 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
SNX17-205ENST00000464279 TRPA1O75762 1119 aa17.17■□□□□ 0.34
SNX17-205ENST00000464279 STARD3NLO95772 234 aa17.17■□□□□ 0.34
SNX17-205ENST00000464279 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
SNX17-205ENST00000464279 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
SNX17-205ENST00000464279 MRC1P22897 1456 aa17.17■□□□□ 0.34
SNX17-205ENST00000464279 HUNKP57058 714 aa17.16■□□□□ 0.34
SNX17-205ENST00000464279 PKN2Q16513 984 aaKnown RBP17.16■□□□□ 0.34
SNX17-205ENST00000464279 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
SNX17-205ENST00000464279 ZNF330Q9Y3S2 320 aaPredicted RBP17.16■□□□□ 0.34
SNX17-205ENST00000464279 COL4A5P29400 1685 aa17.16■□□□□ 0.34
SNX17-205ENST00000464279 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
SNX17-205ENST00000464279 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
SNX17-205ENST00000464279 NBPF5PQ86XG9 351 aaPredicted RBP17.14■□□□□ 0.33
SNX17-205ENST00000464279 GPRC5DQ9NZD1 345 aa17.14■□□□□ 0.33
SNX17-205ENST00000464279 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
SNX17-205ENST00000464279 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
SNX17-205ENST00000464279 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
SNX17-205ENST00000464279 LARGE2Q8N3Y3 721 aa17.13■□□□□ 0.33
SNX17-205ENST00000464279 FAM155AB1AL88 458 aaPredicted RBP17.12■□□□□ 0.33
SNX17-205ENST00000464279 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
SNX17-205ENST00000464279 RGMBQ6NW40 437 aa17.12■□□□□ 0.33
SNX17-205ENST00000464279 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
SNX17-205ENST00000464279 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
SNX17-205ENST00000464279 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
SNX17-205ENST00000464279 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
SNX17-205ENST00000464279 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
SNX17-205ENST00000464279 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
SNX17-205ENST00000464279 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
SNX17-205ENST00000464279 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
SNX17-205ENST00000464279 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
SNX17-205ENST00000464279 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms