RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
CTDSP1-206ENST00000464255 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
CTDSP1-206ENST00000464255 PDIA6Q15084 440 aa17.22■□□□□ 0.35
CTDSP1-206ENST00000464255 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
CTDSP1-206ENST00000464255 SBF1O95248 1867 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 CHL1O00533 1208 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 SRGNP10124 158 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 RASSF7Q02833 373 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-206ENST00000464255 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
CTDSP1-206ENST00000464255 NFKBIEO00221 500 aa17.2■□□□□ 0.34
CTDSP1-206ENST00000464255 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTDSP1-206ENST00000464255 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
CTDSP1-206ENST00000464255 ZNF622Q969S3 477 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTDSP1-206ENST00000464255 MYL6BP14649 208 aa17.19■□□□□ 0.34
CTDSP1-206ENST00000464255 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
CTDSP1-206ENST00000464255 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
CTDSP1-206ENST00000464255 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
CTDSP1-206ENST00000464255 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
CTDSP1-206ENST00000464255 ST5P78524 1137 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 KRT24Q2M2I5 525 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 STYK1Q6J9G0 422 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 C7orf43Q8WVR3 580 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 NMRK2Q9NPI5 230 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
CTDSP1-206ENST00000464255 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
CTDSP1-206ENST00000464255 C21orf2O43822 256 aa17.17■□□□□ 0.34
CTDSP1-206ENST00000464255 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
CTDSP1-206ENST00000464255 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 ANXA1P04083 346 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 LMNB1P20700 586 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 SLX4Q8IY92 1834 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
CTDSP1-206ENST00000464255 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-206ENST00000464255 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-206ENST00000464255 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
CTDSP1-206ENST00000464255 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
CTDSP1-206ENST00000464255 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-206ENST00000464255 ZNF853P0CG23 659 aa17.14■□□□□ 0.33
CTDSP1-206ENST00000464255 NUP98P52948 1817 aa17.14■□□□□ 0.33
CTDSP1-206ENST00000464255 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
CTDSP1-206ENST00000464255 APAF1O14727 1248 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 NPHP1O15259 732 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 NPR1P16066 1061 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 GIGYF2Q6Y7W6 1299 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 KIF6Q6ZMV9 814 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
CTDSP1-206ENST00000464255 GPTP24298 496 aa17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
CTDSP1-206ENST00000464255 TOMM70O94826 608 aa17.11■□□□□ 0.33
CTDSP1-206ENST00000464255 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
CTDSP1-206ENST00000464255 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
CTDSP1-206ENST00000464255 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
CTDSP1-206ENST00000464255 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
CTDSP1-206ENST00000464255 NTSR2O95665 410 aa17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 HSPA6P17066 643 aa17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-206ENST00000464255 GLTPD2A6NH11 291 aa17.09■□□□□ 0.33
CTDSP1-206ENST00000464255 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
CTDSP1-206ENST00000464255 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
CTDSP1-206ENST00000464255 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
CTDSP1-206ENST00000464255 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
CTDSP1-206ENST00000464255 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 POTECB2RU33 542 aa17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 HOXA10P31260 410 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
CTDSP1-206ENST00000464255 RIC1Q4ADV7 1423 aa17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 SNED1Q8TER0 1413 aa17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 HOXB7P09629 217 aa17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
CTDSP1-206ENST00000464255 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
CTDSP1-206ENST00000464255 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
CTDSP1-206ENST00000464255 SLC51AQ86UW1 340 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms